Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr17g00072 ATGGCAGCAGAAGGTCTGGAGGGTGGGAGGATAGTGGTGATAGTGGGTGCATCAAAAGATGTATCTTCAAAACCCATAATGAAGGCCCTGGAAAAGGCATGTCCAAAAGCTGGATATGAGGTTATACTCATTGCCGTTCTTGAACAGCTCATCAGTCCCATGGGAATCAAGATCAGGGTCCCTGATGCAAACCAAAAAATTGTTGACAGCGAATTAGCTAAAATAAGGGACGACTGTAACAAGAGTTCAGAAATCTTGAAACTCTCTCAGTATTGTGGAACAAAAAAGATGGATTTCCAAATTGATGTGGTTGCATACCCTTTCATAGAAGTTGCTTCTGATGCTGCCACAAGCTTAGGGGCAACATGGTTGATCATTGACAGATTTTTGACCAGAGATAAGAAGAAATCACGGTTACCTTGCGGTATAATAAGAATAAGAAGTGATAGCACTGTTCAAAAGTTGTGGGGAACAGACGACTCCAAATCACATTCCGCTATGAAAATCATTCTTGAAAATCCAGTCCCAGATGAAGAGATTTCACCCAAGAGGCATAGAACATCACCAAGTGAACAACAACATTTGACATCAATGAATGACAAAGAGCAAGGAGGAGGAGATCAACAAGAATTTACAACAAGTGATCATGAAGAGTCTCAGATGGAGACAGAATTTACAAACCCACTTTGTTCTGTGTGTAAGAACAAACGGCCAAAAGCTGGATTGTTCAGAGACTTGAGTTACACAGAACTCTGGAAAGCCACACAGGGATTCTCACATAAGAATTTTCTATCAGAGGGCGGATTTGGAGCTGTCTACAAAGCGGAGCTGAGTGGGATAACTATAGCTGTTAAGAAACTTAAAAACACAAGTGTCCAAGGAGAGAAAGAATTTAAATCTGAAGTCAAATTACTTAGCAGAGCAAGGCATGAGAATGTGGTCGTGCTTTTGGGCTCCTGCTCAGAGGGAAAGCACAGACTTCTTGTTTATGAATACGTCTGCAACGGTTCATTGGACCAACATTTATCACAACACTCCCGAAGTCCTCTTACTTGGGAAGAGAGGATCAAAGTTGCTATTGGGGTTTCAAAGGGCTTGCAATACTTGCATGAGAATAACATTGTACACAGAGACGTGAGACCAAACAATATCCTTCTCACACATGATCGTCAAACTCTGCTGGGAGACTTTGGGCTGGCAAGAAATCAGCATCAAGATTCAATCCAGTCAACAGAAGTTATTGGAACTTACGGGTATTTGGCACCTGAATATGCAGAATATGGGAAAGTGTCAGCCAAGATAGATGCGTATTCTTTTGGGGTGGTTCTGCTAGAACTCATCACAGGAATGAGAACAACAGACAAAAGACTTAAAGGAAGAAGTCTTGTTGGATGGGCAAGACCACTACTAAAACAAAGGAAATATCATGATCTAATTGATGAAAGGATCAGCAATTGTCATGATTTTTATCAACTATTCTGGATGGTTCGAATAGCAGAAAAATGTCTGACTAGGGATCCTCAGAAAAGACTAAATATGGTGGCAGTGGTTAATGCTTTAAGTCACATAATGGAAGGAAACACTTGCATCATACTAAAAGACTATTCTTGGCCAGTAAGGTCATCAGACTCTGATGAATCAGAATCAGAAGGTGAGCTGGAAGAAGAAGAAGCCTTCGGCGAGTTAGAAAGCGAAAGCACAGATTCTTCATCATCAAGTATTAGCTGCTCGAATACTATGAGCCAGATTATTGGAAGTCTCCCACCATCGCCTCCAATTTTAACAAACAGCTAA 1794 0.4114 MAAEGLEGGRIVVIVGASKDVSSKPIMKALEKACPKAGYEVILIAVLEQLISPMGIKIRVPDANQKIVDSELAKIRDDCNKSSEILKLSQYCGTKKMDFQIDVVAYPFIEVASDAATSLGATWLIIDRFLTRDKKKSRLPCGIIRIRSDSTVQKLWGTDDSKSHSAMKIILENPVPDEEISPKRHRTSPSEQQHLTSMNDKEQGGGDQQEFTTSDHEESQMETEFTNPLCSVCKNKRPKAGLFRDLSYTELWKATQGFSHKNFLSEGGFGAVYKAELSGITIAVKKLKNTSVQGEKEFKSEVKLLSRARHENVVVLLGSCSEGKHRLLVYEYVCNGSLDQHLSQHSRSPLTWEERIKVAIGVSKGLQYLHENNIVHRDVRPNNILLTHDRQTLLGDFGLARNQHQDSIQSTEVIGTYGYLAPEYAEYGKVSAKIDAYSFGVVLLELITGMRTTDKRLKGRSLVGWARPLLKQRKYHDLIDERISNCHDFYQLFWMVRIAEKCLTRDPQKRLNMVAVVNALSHIMEGNTCIILKDYSWPVRSSDSDESESEGELEEEEAFGELESESTDSSSSSISCSNTMSQIIGSLPPSPPILTNS 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr17g00072 597 PANTHER OS01G0253100 PROTEIN 192 524 - -
Accr17g00072 597 Gene3D Transferase(Phosphotransferase) domain 1 333 534 - -
Accr17g00072 597 SUPERFAMILY Protein kinase-like (PK-like) 244 528 IPR011009 -
Accr17g00072 597 Gene3D Phosphorylase Kinase; domain 1 240 332 - -
Accr17g00072 597 MobiDBLite consensus disorder prediction 547 563 - -
Accr17g00072 597 MobiDBLite consensus disorder prediction 542 597 - -
Accr17g00072 597 ProSitePatterns Tyrosine protein kinases specific active-site signature. 374 386 IPR008266 GO:0004672|GO:0006468
Accr17g00072 597 MobiDBLite consensus disorder prediction 191 210 - -
Accr17g00072 597 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 333 535 - -
Accr17g00072 597 MobiDBLite consensus disorder prediction 172 219 - -
Accr17g00072 597 ProSiteProfiles Protein kinase domain profile. 258 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr17g00072 597 Pfam Protein tyrosine and serine/threonine kinase 261 520 IPR001245 GO:0004672|GO:0006468
Accr17g00072 597 FunFam Proline-rich receptor-like protein kinase PERK8 220 332 - -
Accr17g00072 597 MobiDBLite consensus disorder prediction 564 597 - -
Accr17g00072 597 SMART tyrkin_6 258 520 IPR020635 GO:0004713|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr17g00072 246 525 Trihelix Transcription Factor Family AT5G38560 46.758 2.87e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Accr17g00072 PK_Tyr_Ser-Thr 7.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr17g00072 - - pcin:129314042 817.379