Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr17g00071 ATGAGATCATCAAAACCCATTGTTACAAGCTCTGGATTTCTGATCAGCTTCTGCGTCGTTATTCTGATCAGTTTGACAAGAGCAAGTACTGCTCAAGCACCAAACTACGTTGGAGATGACTGCCATAACAAAACCCCACAAGCACTTACAGACTCCTACAAAGCTAACCTTAACCAGCTCCTATCTTGGCTCTCGACCGACGCAGCCACAAGCAAAGGCTACAACCATACATCCTTTGGCACCTCCACGAACGCTGTCTATGGCCTCTATGACTGCCGTGGTGACGATGCCGGATACTTCTGCCAGTTCTGTGTGTCCACTGCCACTAGAGAGGTTCTCCAACGTTGTCCCAATCAACTTTCTGCTGTGATATGGTATGACTTCTGCATCTTCCGATACTCTAATAAGAACTTCTTTGGGAAGGTGACGACAAGCCCATGGTGGTCTGCCGGCAGAGCGCAGGCATCTGATCCGGCGGAAGGGAAGAAGGCGGAGAGTTTCATGAGGAGCCTAATCGGAAAAGCGATGGAGAACACAACGGAGCTGGGCGCTCGGGGAGAGTTTGATTTGGGTGGTGGAAGAGAAAGGTATGCATTGGTACAATGCAGTAGAGACCTTAATAGTGAAGGGTGCAAACAATGTTTGGAAACTATGGTGGATAGGATTTCTCAGTGCTGTGAGCAGAAGCAAGGATGGCAGGTTTTGGCGCCAAGCTGTATGATCAAATATGATAATTACATGTTTTATCAATCAACCTCTTCACTGAATAATGCTCCTAATCATACAACTACAGCCAAAAAAGGAATTACCAAGTCAAAGGCCTTGATCATAAGCATAAGTGTACTAGTCGCTGTGGTTATAATAAGTTTCTCTGTCTACTTTTGGCGAAAGAAGAATAGAAAAGATGAAATGCCATTGGAGAGGACTCCTGTGTTTGACGATATCTCTCAAAAAGAGAGTTCATTGAACACAGACCTTCCCACAATTCCTCTCTTTGTGATTCAACAAAGTACACATAATTTCTCAGAAAAAGCTAAATTGGGACAGGGAGGATTTGGTCCCGTTTACAAGGGGACAATGCCCGATGGGGAGGAGATTGCTGTGAAAAGACTCTCGCAAACTTCTGGTCAAGGTTTGGAGGAGTTCAAGAATGAAGTTATATTCATAGCGAAACTGCAACACAGAAACCTTGTCAGACTTTTGGGTTGCTGCATCGAGGAAAATGAAAAGCTTCTCGTATATGAGTATATGCAAAACTCAAGTCTTGACTGCCACCTTTTCAATTTTGGACTGGCAAGAACTTTTGATGGAGCCCAAAATCAAGAAGCAACAAGACGAGTAATGGGAACTTATGGTTATATGGCTCCGGAATATGCAATGGGAGGGTTGTTTTCAGTAAAATCAGATGTTTTTAGCTTTGGAGTGCTTCTTCTAGAAATCATTTGTGGGAAGAGAATTAGTGGTTTCTATCTCTCTGATCATGGCCAAAGTCTTCTTATTTATACATGGAATCTGTGGCGTGAAGGAAAATGTTTGGAATTGATGGACCCAATGCTGGAAGATTCTAACGTTGATAAAGGCGGAGTTTTGAAATGCATACACATTGGATTGCTTTGTGTTCAAGAAGACGCATCAGATAGACCAACCATGTCCACTGTTGTTGTCATGCTTGCAAGTGACACGATGACCTTTCCCAAGCCAAATCGTCCTGCATTTTCAGTTGGAAAAATGTTCCTAGGAGATTCATCGTCGACATCAAAAAATTCCAAAGATCCTTCTGTTAATGAAGTAACGATGTCACTCATCACACCCAGGTGA 1818 0.434 MRSSKPIVTSSGFLISFCVVILISLTRASTAQAPNYVGDDCHNKTPQALTDSYKANLNQLLSWLSTDAATSKGYNHTSFGTSTNAVYGLYDCRGDDAGYFCQFCVSTATREVLQRCPNQLSAVIWYDFCIFRYSNKNFFGKVTTSPWWSAGRAQASDPAEGKKAESFMRSLIGKAMENTTELGARGEFDLGGGRERYALVQCSRDLNSEGCKQCLETMVDRISQCCEQKQGWQVLAPSCMIKYDNYMFYQSTSSLNNAPNHTTTAKKGITKSKALIISISVLVAVVIISFSVYFWRKKNRKDEMPLERTPVFDDISQKESSLNTDLPTIPLFVIQQSTHNFSEKAKLGQGGFGPVYKGTMPDGEEIAVKRLSQTSGQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLVYEYMQNSSLDCHLFNFGLARTFDGAQNQEATRRVMGTYGYMAPEYAMGGLFSVKSDVFSFGVLLLEIICGKRISGFYLSDHGQSLLIYTWNLWREGKCLELMDPMLEDSNVDKGGVLKCIHIGLLCVQEDASDRPTMSTVVVMLASDTMTFPKPNRPAFSVGKMFLGDSSSTSKNSKDPSVNEVTMSLITPR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr17g00071 605 Gene3D Phosphorylase Kinase; domain 1 308 411 - -
Accr17g00071 605 FunFam Cysteine-rich receptor-like protein kinase 28 37 137 - -
Accr17g00071 605 MobiDBLite consensus disorder prediction 582 605 - -
Accr17g00071 605 ProSiteProfiles Protein kinase domain profile. 341 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr17g00071 605 SUPERFAMILY Protein kinase-like (PK-like) 327 574 IPR011009 -
Accr17g00071 605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 308 416 - -
Accr17g00071 605 Pfam Protein tyrosine and serine/threonine kinase 344 426 IPR001245 GO:0004672|GO:0006468
Accr17g00071 605 Gene3D - 35 138 IPR038408 -
Accr17g00071 605 Gene3D - 148 248 IPR038408 -
Accr17g00071 605 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 427 - -
Accr17g00071 605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 435 562 - -
Accr17g00071 605 Gene3D Transferase(Phosphotransferase) domain 1 412 562 - -
Accr17g00071 605 Pfam Domain of unknown function (DUF3403) 559 605 IPR021820 GO:0004674
Accr17g00071 605 ProSiteProfiles Gnk2-homologous domain profile. 35 138 IPR002902 -
Accr17g00071 605 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Accr17g00071 605 Pfam Salt stress response/antifungal 41 135 IPR002902 -
Accr17g00071 605 Pfam Salt stress response/antifungal 163 246 IPR002902 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr17g00071 31 605 Receptor kinase-like Gene Family AT4G21410 35.855 4.57e-116 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr17g00071 Stress-antifung 2.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr17g00071 - - gmx:100795922 704.516