Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr17g00070 ATGAGATCATCAAAACCCATTGTTACAAGCTCTGGATTTCTGATCAGCTTCTGCGTCGTTATTCTGATCAGTTTGACAAGAGCAAGTACTGCTCAAGCACCAAACTACGTTGGAGATGACTGCCATAACAAAACCCCACAAGCACTTACAGACTCCTACAAAGCTAACCTTAACCAGCTCCTATCTTGGCTCTCGACCGACGCAGCCACAAGCAAAGGCTACAACCATACATCCTTTGGCACCTCCACGAACGCTGTCTATGGCCTCTATGACTGCCGTGGTGACGATGCCGGATACTTCTGCCAGTTCTGTGTGTCCACTGCCACTAGAGAGGTTCTCCAACGTTGTCCCAATCAACTTTCTGCTGTGATATGGTATGACTTCTGCATCTTCCGATACTCTAATAAGAACTTCTTTGGGAAGGTGACGACAAGCCCATGGTGGTCTGCCGGCAGAGCGCAGGCATCTGATCCGGCGGAAGGGAAGAAGGCGGAGAGTTTCATGAGGAGCCTAATCGGAAAAGCGATGGAGAACACAACGGAGCTGGGCGCTCGGGGAGAGTTTGATTTGGGTGGTGGAAGAGAAAGGTATGCATTGGTACAATGCAGTAGAGACCTTAATAGTGAAGGGTGCAAACAATGTTTGGAAACTATGGTGGATAGGATTTCTCAGTGCTGTGAGCAGAAGCAAGGATGGCAGGTTTTGGCGCCAAGCTGTATGATCAAATATGATAATTACATGTTTTATCAATCAACCTCTTCACTGAATAATGCTCCTAATCATACAACTACAGCCAAAAAAGGAATTACCAAGTCAAAGGCCTTGATCATAAGCATAAGTGTACTAGTCGCTGTGGTTATAATAAGTTTCTCTGTCTACTTTTGGCGAAAGAAGAATAGAAAAGATGAAATGCCATTGGAGAGGACTCCTGTGTTTGACGATATCTCTCAAAAAGAGAGTTCATTGAACACAGACCTTCCCACAATTCCTCTCTTTGTGATTCAACAAAGTACACATAATTTCTCAGAAAAAGCTAAATTGGGACAGGGAGGATTTGGTCCCGTTTACAAGGGGACAATGCCCGATGGGGAGGAGATTGCTGTGAAAAGACTCTCGCAAACTTCTGGTCAAGGTTTGGAGGAGTTCAAGAATGAAGTTATATTCATAGCGAAACTGCAACACAGAAACCTTGTCAGACTTTTGGGTTGCTGCATCGAGGAAAATGAAAAGCTTCTCGTATATGAGTATATGCAAAACTCAAGTCTTGACTGCCACCTTTTCAATGAAGAAAGTAGAAGGAAACTAAATTGGAAACAAAGGTTGCATATTATTAATGGGATTGCAAAAGGAATTTTGTATCTTCATGAAGACTCTCGACTCAAAGTAATTCATAGAGATTTGAAAGCTAGTAATGTCCTTTTAGACTCTGAAATGAACCCAAAAATATCAGATTTTGGACTGGCAAGAACTTTTGATGGAGCCCAAAATCAAGAAGCAACAAGACGAGTAATGGGAACTTATGGTTATATGGCTCCGGAATATGCAATGGGAGGGTTGTTTTCAGTAAAATCAGATGTTTTTAGCTTTGGAGTGCTTCTTCTAGAAATCATTTGTGGGAAGAGAATTAGTGGTTTCTATCTCTCTGATCATGGCCAAAGTCTTCTTATTTATACATGGAATCTGTGGCGTGAAGGAAAATGTTTGGAATTGATGGACCCAATGCTGGAAGATTCTAACGTTGATAAAGGCGGAGTTTTGAAATGCATACACATTGGATTGCTTTGTGTTCAAGAAGACGCATCAGATAGACCAACCATGTCCACTGTTGTTGTCATGCTTGCAAGTGACACGATGACCTTTCCCAAGCCAAATCGTCCTGCATTTTCAGTTGGAAAAATGTTCCTAGGAGATTCATCGTCGACATCAAAAAATTCCAAAGATCCTTCTGTTAATGAAGTAACGATGTCACTCATCACACCCAGGTGA 1986 0.424 MRSSKPIVTSSGFLISFCVVILISLTRASTAQAPNYVGDDCHNKTPQALTDSYKANLNQLLSWLSTDAATSKGYNHTSFGTSTNAVYGLYDCRGDDAGYFCQFCVSTATREVLQRCPNQLSAVIWYDFCIFRYSNKNFFGKVTTSPWWSAGRAQASDPAEGKKAESFMRSLIGKAMENTTELGARGEFDLGGGRERYALVQCSRDLNSEGCKQCLETMVDRISQCCEQKQGWQVLAPSCMIKYDNYMFYQSTSSLNNAPNHTTTAKKGITKSKALIISISVLVAVVIISFSVYFWRKKNRKDEMPLERTPVFDDISQKESSLNTDLPTIPLFVIQQSTHNFSEKAKLGQGGFGPVYKGTMPDGEEIAVKRLSQTSGQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLVYEYMQNSSLDCHLFNEESRRKLNWKQRLHIINGIAKGILYLHEDSRLKVIHRDLKASNVLLDSEMNPKISDFGLARTFDGAQNQEATRRVMGTYGYMAPEYAMGGLFSVKSDVFSFGVLLLEIICGKRISGFYLSDHGQSLLIYTWNLWREGKCLELMDPMLEDSNVDKGGVLKCIHIGLLCVQEDASDRPTMSTVVVMLASDTMTFPKPNRPAFSVGKMFLGDSSSTSKNSKDPSVNEVTMSLITPR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr17g00070 661 ProSiteProfiles Protein kinase domain profile. 341 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr17g00070 661 SUPERFAMILY Protein kinase-like (PK-like) 323 613 IPR011009 -
Accr17g00070 661 Gene3D Phosphorylase Kinase; domain 1 308 416 - -
Accr17g00070 661 Pfam Domain of unknown function (DUF3403) 615 661 IPR021820 GO:0004674
Accr17g00070 661 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 308 416 - -
Accr17g00070 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 657 - -
Accr17g00070 661 CDD STKc_IRAK 347 613 - -
Accr17g00070 661 Pfam Protein tyrosine and serine/threonine kinase 344 611 IPR001245 GO:0004672|GO:0006468
Accr17g00070 661 ProSiteProfiles Gnk2-homologous domain profile. 35 138 IPR002902 -
Accr17g00070 661 Gene3D Transferase(Phosphotransferase) domain 1 417 622 - -
Accr17g00070 661 MobiDBLite consensus disorder prediction 638 661 - -
Accr17g00070 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Accr17g00070 661 Pfam Salt stress response/antifungal 163 246 IPR002902 -
Accr17g00070 661 Pfam Salt stress response/antifungal 41 135 IPR002902 -
Accr17g00070 661 FunFam Cysteine-rich receptor-like protein kinase 28 37 137 - -
Accr17g00070 661 SMART serkin_6 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr17g00070 661 Gene3D - 35 138 IPR038408 -
Accr17g00070 661 Gene3D - 148 248 IPR038408 -
Accr17g00070 661 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 417 621 - -
Accr17g00070 661 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr17g00070 15 661 Receptor kinase-like Gene Family AT4G05200 41.691 3.93e-172 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr17g00070 PK_Tyr_Ser-Thr 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr17g00070 - - gmx:100795922 828.935