Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00208 ATGGTGTTACAATCCTACTTAGTTAGGATACCTACTTTTCTGCTCCTGATTTTCTCTTTGCATACTTTGGCTGATCTTAATTCAGAAAAGAAAGCCCTCCTTGACTTTGCTGCTGCAGTTCATCACGGCCAAAAAATTAATTGGAATTCTGATACCTCAGTCTGCACTTCTTGGGTGGGAATCACTTGCAGCCCAAATGGCTCTCATGTGCTTTCTCTGCGGCTTCCCGCTGTCGGGCTGCGTGGCTCGCTCCTTGCCAATACGATTAGTAAGCTGCATGGTCTCATGATCCTCAGTCTTCGGTCCAACAGCCTGAGCGGAAGTCTTCCAAATGACATACTTTCCCATCCTTCCCTCCGCTTTATATATCTTCAACATAATAACTTTTCTGGTGATATCCCTCACTCTGTGTCTCACCAGCTTCACTTTCTTGATCTGGCCCACAACTCTTTCACAGGAACAATTCCAGCCTTAATTCTGAACTTGCCATATCTAACTGGATTAGAACTTCAGAATAACTCTCTCAGCGGACCAATCCCAGATTTAAAAACCTCAAAGCTTAAGACTTTGAATTTGAGCTACAACAACTTAAATGGTTCAATTCCTTCAGCCCTCCAGAAATTTCCTGCCTCCTCATTTCGAGGGAATCTCAAGTTATGTGGACCACCTGTACACCAATGTTCTTCAGCTTCTCCATCTTTCGTGCTGTCTCCACCAACGGTCTCATCAAAACCAAGTCATCTCTCCAGCAGGAAGCTGAATACAGGTGCTATAATTGCAATTGTCTTCATTGGTTTTACCGTGCTGCTTCTTCCGCTTATGATGGTAGTGTTGTGCTGTCTCAAGAAAAGAGATGGCGGACCAAATGCAACACTAAAAGAGAAGGATGACAAGCTTAAGGAGGACTTTGGCAGTGGAGTGCAAGAACTAGAGAAAAACAAGCTAATATGTTTTGAAGGTTGTTGTTATAGTTTTGATCTTGAGGACCTATTAAGAGCTTCTGCTGAAGTACTTGGGAAGGGAAACTGCGGGACGACTTACAAAGCCATCCTGGAGGAGGGTACGGTGGTGGTTGTGAAGAGGTTAAAAGAAGTAGGGCTAGGGAAAAAAGAATTTGAACATCAAATGGAGACTGTTCAAAGGCTAGGTCATCACCGAAATGTTATTCCTGTTCGTGCTTACTACTATTCCAAGGACGAAAAACTGCTGGTTTATGATTACATAGCACTTGGAAGCCTTTCCAGGCTATTGCATGGGACCAAGGGAGCTGAACGAACTCCATTAGACTGGGAATCCAGACTGAAGATCTCACTTGGAGCTGCTAGAGGGATTGCACATATCCACTCAGCTAGCGGACGGAAATTTGTCCATGGAAATATAAAATCAGCTAATGTGCTTGTCACAGTAGATGTGGAAGGCTGCATATCAGATTTTGGCTTAACTCCTCTAATCAGTTTGTCTGTCCCATCTAGAAGTCCAGGGTACCAAGCACCAGAGGCTATTGAAACCCGAAAATGCTCCCAGAAGTGTGATGTATATAGCTTTGGCGTTGTCCTTCTTGAGATGCTGACAGGTAAAACACCAGTTCAGTATTCAGGGCATGATGAAGTGGAGGATCTTCCAAAGTGGGTTCAGTCTGTTGTTAGGGAGGAATGGACTGCTGAAGTATTTGATGTACAGCTGATGAGGTATCCAAATATTGAAGAAGAACTGGTGCAGATGCTGCAGTTAGCAATGGCATGTGTGGCAAGGGAGCCTGACACGAGACCTTCCATGGAGGAAGTCGTTAAAATAATTGAAGACATCAGAGCATCCAATTCCGAGTGCACAAATGTATGA 1839 0.441 MVLQSYLVRIPTFLLLIFSLHTLADLNSEKKALLDFAAAVHHGQKINWNSDTSVCTSWVGITCSPNGSHVLSLRLPAVGLRGSLLANTISKLHGLMILSLRSNSLSGSLPNDILSHPSLRFIYLQHNNFSGDIPHSVSHQLHFLDLAHNSFTGTIPALILNLPYLTGLELQNNSLSGPIPDLKTSKLKTLNLSYNNLNGSIPSALQKFPASSFRGNLKLCGPPVHQCSSASPSFVLSPPTVSSKPSHLSSRKLNTGAIIAIVFIGFTVLLLPLMMVVLCCLKKRDGGPNATLKEKDDKLKEDFGSGVQELEKNKLICFEGCCYSFDLEDLLRASAEVLGKGNCGTTYKAILEEGTVVVVKRLKEVGLGKKEFEHQMETVQRLGHHRNVIPVRAYYYSKDEKLLVYDYIALGSLSRLLHGTKGAERTPLDWESRLKISLGAARGIAHIHSASGRKFVHGNIKSANVLVTVDVEGCISDFGLTPLISLSVPSRSPGYQAPEAIETRKCSQKCDVYSFGVVLLEMLTGKTPVQYSGHDEVEDLPKWVQSVVREEWTAEVFDVQLMRYPNIEEELVQMLQLAMACVAREPDTRPSMEEVVKIIEDIRASNSECTNV 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00208 612 Gene3D Phosphorylase Kinase; domain 1 300 407 - -
Accr16g00208 612 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Accr16g00208 612 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Accr16g00208 612 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 408 611 - -
Accr16g00208 612 ProSiteProfiles Protein kinase domain profile. 332 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00208 612 Gene3D Transferase(Phosphotransferase) domain 1 409 611 - -
Accr16g00208 612 FunFam pollen receptor-like kinase 1 300 407 - -
Accr16g00208 612 CDD STKc_IRAK 338 602 - -
Accr16g00208 612 Gene3D Ribonuclease Inhibitor 185 228 IPR032675 -
Accr16g00208 612 PANTHER OS05G0588300 PROTEIN 13 604 - -
Accr16g00208 612 SUPERFAMILY L domain-like 42 218 - -
Accr16g00208 612 Pfam Protein kinase domain 335 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00208 612 FunFam Probable inactive receptor kinase RLK902 26 183 - -
Accr16g00208 612 SUPERFAMILY Protein kinase-like (PK-like) 336 599 IPR011009 -
Accr16g00208 612 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00208 13 610 Receptor kinase-like Gene Family AT5G58300 59.473 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr16g00208 Pkinase 5.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00208 - - gmx:100810832 864.374