LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr16g00197	ATGGAGAATCTTCCTTCGGATCGTAGAAAGGCAATCGAGGAACTGGAGAGGGGCCGTGACTTTGCCTCCCAGCTCCGCCGTCTCGTTCTCAACCCCGCCGGCGACGTAACGACGCCGTCTGCGCGAGATCTTGCGGACGAGGTGGTGACCTCCTTTTCCAACACCCTTTTGCTCTTGAATCTCCCCTCTCACGATTCCCAGACGCAACAATATTCTTCTTGTGTTCTTCCTGCTAAATCTGACGACTCTGAAGATAGTTGCAAGAGCACTTCCGCCGTTAGGGAACGAAGAGGCTCTTATAAGAGAAGGAGAACATCACAATCATCGGAGATAGACTCTGAAGCTCCGATTGATGATGGTCATGCGTGGAGAAAGTATGGTCAAAAGAATATAATGAATGCCCCATACCCAAGGAACTACTTCAGATGCACTCACAGGTATGACCAGGGGTGCCAAGCAACCAAGCAGGTGCAGAGAATTCAAGAGAAGCCTGTGCTGTACAGGACAACTTACTATGGCCAACACACGTGCAACAGAAACTCGCTGAACAACGAGATCCTTTTGGATGCTAATTCTCCTTCTCACCCTTCCCTATTTATCAGTTTTGACAATAACCTCCCTACCGATCAGGCCTTCTTCTCATCATCACCATCTCCTCCCATGACAATAACACAGTGTAAGGAAGAGATTCCTTCATCTTCATCGGGGGATTACGTTGTCTCCCCTGAATCAGACGACAAGGATCCCATTTCTGATATGTTGTGCGGTGATTTTGTCTTTGGGCCCTTTGATTGTTTCGATGGATGA	807	0.4845	MENLPSDRRKAIEELERGRDFASQLRRLVLNPAGDVTTPSARDLADEVVTSFSNTLLLLNLPSHDSQTQQYSSCVLPAKSDDSEDSCKSTSAVRERRGSYKRRRTSQSSEIDSEAPIDDGHAWRKYGQKNIMNAPYPRNYFRCTHRYDQGCQATKQVQRIQEKPVLYRTTYYGQHTCNRNSLNNEILLDANSPSHPSLFISFDNNLPTDQAFFSSSPSPPMTITQCKEEIPSSSSGDYVVSPESDDKDPISDMLCGDFVFGPFDCFDG	268

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr16g00197	268	Gene3D	WRKY domain	102	179	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Accr16g00197	268	Pfam	WRKY DNA -binding domain	118	178	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Accr16g00197	268	MobiDBLite	consensus disorder prediction	81	117	-	-
	Accr16g00197	268	MobiDBLite	consensus disorder prediction	77	117	-	-
	Accr16g00197	268	ProSiteProfiles	WRKY domain profile.	112	175	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Accr16g00197	268	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	14	194	IPR044810	GO:0003700
	Accr16g00197	268	SMART	WRKY_cls	117	179	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Accr16g00197	268	SUPERFAMILY	WRKY DNA-binding domain	115	179	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr16g00197	1	202	WRKY Transcription Factor Family	AT3G56400	36.530	8.76e-44	148

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Accr16g00197		WRKY	2.4e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr16g00197	-		-	gmx:100170682	240.35