Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00194 ATGATGCACTTCTTGTTATTTCTTCTCTTTCTTTTTGCTCCAGCCACAGTACTTTCCGACGACCCAGCCTTCAACGACGACGTGTTGGGTTTGATTGTCTTCAAAGCTGGTTTGCAAGACCCGAAAGGTAAACTTTCTACTTGGAACGAAGATGACAATAATCCCTGCAAGTGGGCTGGAGTCAAATGTGATCCTACAACCAATCGGGTCTCTGCCATTGTGCTTGACGGCTTTTCTCTCTCTGGGCACATTGATCGAGGGCTCCTGAGATTACAGTCCCTTCAAATTCTCTCACTTTCCAAGAACAACTTCTCTGGGTCCATAAACTCAGATCTTCTTCGGCCTGGGAGTTTGCAAGTTTTGGACTTAAGTGAGAACAACCTCTCTGGGTCTATACCAGAAGGATTCTTCCGCCAATGTGGGTCCTTAAGATCAGTTTCATTTGCCAAAAATAAGCTTACTGGTAAGATTCCTGATTCCTTGAGTTCTTGCACCTTGTTAGTAACTGTTAACTTCTCTTCCAACCAGCTAAATGGGAATTTACCTTCTGGGATATGGTTTTTGAGACAACTACAGTCACTCGATCTGTCAAATAACTTGCTGGAGGGAGAGGTTCCTGAGGGAATTGAGAATTTGTATGATTTGAAGGAGTTAAATTTGCAGAGGAATCGCTTCATTGGAAGGCTTCCTGGTGATATTGGAGGATGCATGTTTTTAAAGTCACTTGATTTGAGTGATAATTTTCTCTTTGGGACAATTCCTGAGTCAATGCAGGGACTCAATTCCTGCACATCCCTCAATTTACACGGGAATTCACTCACTGGAGCAGTTCCTGATTGGATTGGAGAATTAAAAAATCTGGAGATGTTGGATCTTTCAGCAAATAGATTTTCTGGTTTGATTCCAAAATCAATAGGCAATCTCAACTCGCTGAATAAATTAAATCTATCCAGGAATCATTTTACCGGAAACTTGCCGGAATCAATCGTGACCTGTGTTAAGCTTTTGGCTCTAGACATCAGCCAAAATCAGTTAGAAGGGCGTCTTCCCTCATGGATTTTCAGGATGGGCTTACGAAGTGTTTCACTTTCAGGGAACAGCTTCAATAGCAGCAATTATCCTTTATCTACCTCCACACCTGAATCTTATCATGGTCTTCAGGTTTTGGACTTGTCGTCAAATGCGTTTTCTGGCGAACTTCCTTCTAATATTGGGGGCCTTAGTAGCCTGCAAGTATTAAATATGTCCGCCAACAATAACTCTGGTCCTATTCCAGTGGGTATAGGAGACCTTAAATCCTTATACATTCTTGATTTGAGTGACAACAAACTTAATGGAAGTATTCCCCCTGAACTAGAGGGGGCTTTTTCACTCAGTGAACTGCGGTTACAGAACAACTTCCTAAGTGGGGAAATTCCAGCCCAAATTGAAAAGTGCTCTTCGCTAACAACTTTGATTCTTTCTCATAACAAACTTACCAGTTCAATCCCAGCTGCCATTGCAAACTTGACTAATCTTCAGTATGTGGACTTGTCATGGAATGAACTCTCTGGAAGTTTACCCAAAAATCTCTCAAATCTTTCCCACCTTATATTTTTTAATGTCTCTTACAACCAGCTTCAAGGGGAGCTACCAGTGGGTGGCTTCTTCAATATCATCTCTCCCTCATCTGTCACTGGCAATCCATCCCTATGTGGTTCTGTTGTCAATCATTCCTGCCCTTCAGTCCATCCCAAACCTATTGTCCTAAACACCAATTCTTCTTACTCCAACTCCAACTCCTCCTCTCAAAACCATGGTCATAAAAAGATCATTCTAAGCATTTCTTCTCTTATTGCTATTGGTGCTGCTGCTATTATCACTGTTGGTGTGGTGGCCATTACTGTCCTAAATGCCCATGTTCGTCATTCAATGTCTCGTTCTGCTGCCCCATTTACATTATCTGGTGGTGAGGACTATAGTTGTTCTCCTGCTAATGATCCAAACTATGGCAAGCTTGTTATGTTTTCTGGTGAGGCTGGTTTTGATGATGGGGCAAATAATCTCCTAAACAAAGAGAGTATAATAGGTCGTGGTGGGTTTGGAATTGTTTATCACACTGTCCTTCGAGATGGGCATTCTGTTGCAATCAAGAAGCTTACAGTCTCTGGATTGATCAAGTCACAAGAAGACTTTGAGAGGGAAGTGAAAAATCTTGCGACAATCAAACACCAGAATCTTGTGGGACTTAAAGGGTATTACTGGACTTCATCCTTGCAGCTCCTTATTTATGAGTATCTATCCAGAGGCAGTCTGCATAAGCTCCTCCATGAAGATGAGAATGGCAGAAACATGCTTTCTTGGCGACAAAGGTTCAAGATTATTCTTGGAATGGCAAAAGGGTTGGTTCATTTGCATCAAAAGAATATAATTCACTACAATCTAAAATCAGCAAATATTTTGATTGATTGCTCTGGTGAGCCAAAGATAGGAGATTTTGGCTTGGTGAGGCTTTTGCCAGTGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGTTACATGGCCCCTGAGTTTGCATGCCGGACAGTGAAGATAACTGAGAAATGTGATGTGTATGGTTTTGGGATCCTGGTTCTTGAGGTGGTGACCGGGAAAAGACCAGTGGAATACATGGAGGATGATGTGGTTGTTCTGTGTGATATGGTAAGGGGTGCATTGGAGGAAGGCAGGGTGGAGCAATGCGTGGACAGGATGCTTGTGGGCAATTTTGCTGCTGAGGAAGCAATTCCTGTGGTTAAATTGGGATTAATTTGTGCATCACAAGTGCCTTCAAACCGCCCAGATATGGCCGAGGCAGTTAGTATATTAGAGTTGATCCAATGCCCTTCAGAAGGACAAGAGGAATTAGAATGA 2904 0.4236 MMHFLLFLLFLFAPATVLSDDPAFNDDVLGLIVFKAGLQDPKGKLSTWNEDDNNPCKWAGVKCDPTTNRVSAIVLDGFSLSGHIDRGLLRLQSLQILSLSKNNFSGSINSDLLRPGSLQVLDLSENNLSGSIPEGFFRQCGSLRSVSFAKNKLTGKIPDSLSSCTLLVTVNFSSNQLNGNLPSGIWFLRQLQSLDLSNNLLEGEVPEGIENLYDLKELNLQRNRFIGRLPGDIGGCMFLKSLDLSDNFLFGTIPESMQGLNSCTSLNLHGNSLTGAVPDWIGELKNLEMLDLSANRFSGLIPKSIGNLNSLNKLNLSRNHFTGNLPESIVTCVKLLALDISQNQLEGRLPSWIFRMGLRSVSLSGNSFNSSNYPLSTSTPESYHGLQVLDLSSNAFSGELPSNIGGLSSLQVLNMSANNNSGPIPVGIGDLKSLYILDLSDNKLNGSIPPELEGAFSLSELRLQNNFLSGEIPAQIEKCSSLTTLILSHNKLTSSIPAAIANLTNLQYVDLSWNELSGSLPKNLSNLSHLIFFNVSYNQLQGELPVGGFFNIISPSSVTGNPSLCGSVVNHSCPSVHPKPIVLNTNSSYSNSNSSSQNHGHKKIILSISSLIAIGAAAIITVGVVAITVLNAHVRHSMSRSAAPFTLSGGEDYSCSPANDPNYGKLVMFSGEAGFDDGANNLLNKESIIGRGGFGIVYHTVLRDGHSVAIKKLTVSGLIKSQEDFEREVKNLATIKHQNLVGLKGYYWTSSLQLLIYEYLSRGSLHKLLHEDENGRNMLSWRQRFKIILGMAKGLVHLHQKNIIHYNLKSANILIDCSGEPKIGDFGLVRLLPVLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEQCVDRMLVGNFAAEEAIPVVKLGLICASQVPSNRPDMAEAVSILELIQCPSEGQEELE 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00194 967 CDD STKc_IRAK 689 956 - -
Accr16g00194 967 SUPERFAMILY L domain-like 43 373 - -
Accr16g00194 967 SMART LRR_sd22_2 188 211 - -
Accr16g00194 967 SMART LRR_sd22_2 431 454 - -
Accr16g00194 967 SMART LRR_sd22_2 239 262 - -
Accr16g00194 967 SMART LRR_sd22_2 503 529 - -
Accr16g00194 967 SMART LRR_sd22_2 284 310 - -
Accr16g00194 967 Pfam Leucine rich repeat 239 297 IPR001611 GO:0005515
Accr16g00194 967 Pfam Leucine rich repeat 457 516 IPR001611 GO:0005515
Accr16g00194 967 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 304 577 - -
Accr16g00194 967 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Accr16g00194 967 SMART serkin_6 683 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00194 967 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 25 303 - -
Accr16g00194 967 Gene3D Transferase(Phosphotransferase) domain 1 760 960 - -
Accr16g00194 967 SUPERFAMILY Protein kinase-like (PK-like) 685 957 IPR011009 -
Accr16g00194 967 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 677 759 - -
Accr16g00194 967 Gene3D Phosphorylase Kinase; domain 1 676 759 - -
Accr16g00194 967 Pfam Protein kinase domain 684 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00194 967 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Accr16g00194 967 PRINTS Leucine-rich repeat signature 188 201 - -
Accr16g00194 967 PRINTS Leucine-rich repeat signature 118 131 - -
Accr16g00194 967 Gene3D Ribonuclease Inhibitor 304 579 IPR032675 -
Accr16g00194 967 SUPERFAMILY L domain-like 284 557 - -
Accr16g00194 967 SMART LRR_typ_2 188 211 IPR003591 -
Accr16g00194 967 SMART LRR_typ_2 212 236 IPR003591 -
Accr16g00194 967 SMART LRR_typ_2 503 526 IPR003591 -
Accr16g00194 967 SMART LRR_typ_2 431 455 IPR003591 -
Accr16g00194 967 SMART LRR_typ_2 284 307 IPR003591 -
Accr16g00194 967 SMART LRR_typ_2 308 332 IPR003591 -
Accr16g00194 967 SMART LRR_typ_2 527 551 IPR003591 -
Accr16g00194 967 SMART LRR_typ_2 116 139 IPR003591 -
Accr16g00194 967 SMART LRR_typ_2 91 115 IPR003591 -
Accr16g00194 967 SMART LRR_typ_2 479 502 IPR003591 -
Accr16g00194 967 SMART LRR_typ_2 383 407 IPR003591 -
Accr16g00194 967 Gene3D Ribonuclease Inhibitor 24 303 IPR032675 -
Accr16g00194 967 ProSiteProfiles Leucine-rich repeat profile. 117 139 IPR001611 GO:0005515
Accr16g00194 967 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 262 368 IPR046959 -
Accr16g00194 967 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 760 962 - -
Accr16g00194 967 Pfam Leucine Rich Repeat 190 212 IPR001611 GO:0005515
Accr16g00194 967 ProSiteProfiles Protein kinase domain profile. 683 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00194 1 966 Receptor kinase-like Gene Family AT3G56370 61.689 0.0 1129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Accr16g00194 Pkinase 3.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00194 - - gmx:100790365 1467.6