Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00181 ATGCTGCACACATACGATATCGCCGTTGAAGAAGACGCAGCGACGGTCGGACAGCCATCCTCGGGGGTTGTTTTGCTCGGAAAATACGAGTTGAAGGAGTTGTTAGGTGTGGGAGCCTCTGCCAAGGTGTATCACGCAACGAATGTGGACACGGGACAGAGCGTGGCCATCAAAGCCGTGAGCAAGAACCATGTTTTCAGAGGAGGCCTCACGGCGCACATTGAGAGGGAAATCTCTATCATGCGCCGCCTCCACCATCCCCACACCCTCAAGCTCTTCGAAGTCCTCGCCTCCAAGAATAAAATTTACTTCGTCCTCGAATTCGCCCAGGGCGGCGAGCTCTTTCACAAGGTCGCTCAGGGCCGTTTCTCCGAAGATCTCAGCCGTCGCTATTTCCATCAACTAATTTCCGCCGTCCGTTACTGCCACTCCGCCGGCGTCTTCCACCGCGACCTCAAGCTCGACAACCTCTTAATCGACCAACATACAGACCTCAAGGTCTCCGACTTCGGGTTGAGTGCTCTGAAGGACCACGTCAGAGCCGATGGGCTGCTGCACACCGTGTGTGGCACACCGGCTTACGTGGCGCCGGAGATGCTCGCCAAGAAAGGCTACGATGGAGCGAAGGTGGACGTGTGGTCTTGCGGAGTGATCCTGTTCGTCCTCACGGCCGGGTACTTGCCGTTCAACGACCACAATCTGGCGGCCATGTACAGGAAAATCTACAGAGGGCAGTTTCGGTTCCCGAGATGGACGTCGCCGGAGCTACGGCGTTTTGTGTGTCGGCTGCTGGACAAGAACCCCGAGACGAGAATCACGGTGGATGAGATGATGGGGGACCCATGGTTCAGCAAAGGGTATCGGGAGGTGCGGATTGAACACAAGGAATTCGAATTGGAGCGGGAAAGCCGATCCAGGGGACTGAACGCCTTCGATTTGATATCGTTTTCGTCCGGTTTGGATATGTCGGGCATGTTGGGGGAAGCGGGAGTTTGGGAGGGGGTGGAACGCATGGTTTCAGGGGAGAAACCGGCGAAGATATTGGAGAAGGTGGAAGGAGTGGCGAAAGCAGAGGGGGTGAGGGTGAGGGTGAGGAAGGAGGAGAACGAGGAGGGGGCGGAGCTGGAGGGGCAGGATGGTAATTTAAAGATACTTGTTTCAATATACCGGCTAACGGAGAGACTGGTTGTGGTGGAGGCGAAGAGAAGAGAGGGAAAAGAGAAGGGGGCGAAATTCTGGGAGGAGAAATTGCAGCCGGAGCTACATAGATTGGTGTATAAAGACTGA 1287 0.5556 MLHTYDIAVEEDAATVGQPSSGVVLLGKYELKELLGVGASAKVYHATNVDTGQSVAIKAVSKNHVFRGGLTAHIEREISIMRRLHHPHTLKLFEVLASKNKIYFVLEFAQGGELFHKVAQGRFSEDLSRRYFHQLISAVRYCHSAGVFHRDLKLDNLLIDQHTDLKVSDFGLSALKDHVRADGLLHTVCGTPAYVAPEMLAKKGYDGAKVDVWSCGVILFVLTAGYLPFNDHNLAAMYRKIYRGQFRFPRWTSPELRRFVCRLLDKNPETRITVDEMMGDPWFSKGYREVRIEHKEFELERESRSRGLNAFDLISFSSGLDMSGMLGEAGVWEGVERMVSGEKPAKILEKVEGVAKAEGVRVRVRKEENEEGAELEGQDGNLKILVSIYRLTERLVVVEAKRREGKEKGAKFWEEKLQPELHRLVYKD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00181 428 FunFam Aurora kinase A 23 112 - -
Accr16g00181 428 Gene3D Phosphorylase Kinase; domain 1 25 110 - -
Accr16g00181 428 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Accr16g00181 428 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Accr16g00181 428 CDD CIPK_C 309 421 - -
Accr16g00181 428 Gene3D Transferase(Phosphotransferase) domain 1 111 290 - -
Accr16g00181 428 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 23 403 - -
Accr16g00181 428 FunFam Non-specific serine/threonine protein kinase 109 290 - -
Accr16g00181 428 SUPERFAMILY Protein kinase-like (PK-like) 25 291 IPR011009 -
Accr16g00181 428 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00181 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Accr16g00181 428 Pfam NAF domain 308 363 IPR004041 GO:0007165
Accr16g00181 428 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00181 428 Gene3D Kinase associated domain 1, KA1 304 427 - -
Accr16g00181 428 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00181 15 425 CBL-interacting serine-threonine protein kinases AT2G30360 56.667 4.65e-167 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr16g00181 Pkinase 4.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00181 - K12761 tcc:18602243 530.406