Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00135 ATGATGCATCGTCGCACTCTTCTTCAGCCCTCCACCTGGTCATTCCCCAATGACTTAACCTCTATTTTTTATCCCTTCGATCTTTCCTCCCCCTTCTTCTTTGAAGATGATCATTTCCAATTCCCAGTTGAAATGATGGGATCAGAAGCATCCAAATCCATAGAGAATTCTTACTTCAATGAACTTGAAGCTTCTTTTGTCTTCTCTCAAGACAATTTCCTGTACCCAGCTACTGAAGAAGATATTCTGGGAATGGATTTGGGTGCTCTTGACCCTGATTGGAGTACCCAGTTTCTGAATATCCATGGAAGCCCAGAAGAAAGTGAAGAAAGTTTTCATCTTTCCCAGAATCTATCTTGTGAAGCAGAAGATTCCTGGGGTTCTAGTCCATGCATGAAATCATCAGAATATTCCTCTCTTCAACCAACATCACTGAACTTGCCTCAAGAAGACATGGAAATGGATACCCAAGTGATTCTTCCCCATCTCCTAGAAGCCCATGTTGAAGCAAAAGATCAGAACCAGAACGCACTTGTAGAAGAAACCTTGAGATGCATAAACCAGAAAACAAGCCCACTGGCAGAGGATCCTACGGAACGCCTAGCATTTCACTATTCTTCCCAAAACATTACTGGAAATCCACAGGGGCATTTTCTCAAACAGGAGGCGTGCAAAAATTTTGATACCGCATTCAAGGTACTTTACCAAAGCACACCCCATGGAATATTTGCTCATTCTGTAGCGAATTCAGCAATGTTAGAAGCCATACCAGAGGATTCAGAAGCTGTACACATAATAGACTTTGATTTGGGAGAAGGGGTTCAGTGGGCCCCTGTGATAGAGGCCATTTCTCAACAGAAAAAAGCAGTGAAGTTCACATTAATCAAATGGGAAAAAGAGCAAGAAAACTCTGAGGAACCCAGAAGGAACCTTATTGAGTACGCAAGATCATGTGGTCTCGAGATGAAGGTAGAAGAAAAAAGTTTTGAGGAATTAGTTACAGAGCTCAAGAAATTGAACAAAAGAGGAGGGAATTTAAAAAGAGATTTCTTAATCTTTAACTGCATGGTGGGTCTTGCTCACATGGGGAGAGGAAGAAGCAGAAGATCAGTCATGGAGTTTCTGAATTTAGGCAAGAACATGATCAACAAGAACACCTTCAACAGGGGGATTATCAGTTTTGGGGATGGAGAAGCCGACGAAAAACTGAGAAACAGTCTGAATTTCAGGTCATTCTTCGACGGTAACATGATGCATTACAAGGCATTAATGGAATCAATTGAATCAAACTTCCCGGCTTGTTTCTTACAAGCAAGAACAGCAATAGAGTTCTTATTTGTGGGACCCTTCGTGTCTTCCGGTGTTTGGATGAAGAAGTGGGAAGAATTGAGAGGAAATCACCATTTTCTGGCAAGGAATGGATTTGGTATAGAAGGAAGAAGATTAAGCGAAGAGATTTTAATGGAAGCGAGGGAAATATTGAGAGGAAGCAGGGGGGGATCGTATGAGGCAAGGATTGAAGGGCAAAATGGGAATGAAATGGTTCTTTTATGGAAGGGGACCCAGTTAGTCAAAGTGTCAACGTGGGGAAGTCAAAAGGCCTGA 1605 0.4206 MMHRRTLLQPSTWSFPNDLTSIFYPFDLSSPFFFEDDHFQFPVEMMGSEASKSIENSYFNELEASFVFSQDNFLYPATEEDILGMDLGALDPDWSTQFLNIHGSPEESEESFHLSQNLSCEAEDSWGSSPCMKSSEYSSLQPTSLNLPQEDMEMDTQVILPHLLEAHVEAKDQNQNALVEETLRCINQKTSPLAEDPTERLAFHYSSQNITGNPQGHFLKQEACKNFDTAFKVLYQSTPHGIFAHSVANSAMLEAIPEDSEAVHIIDFDLGEGVQWAPVIEAISQQKKAVKFTLIKWEKEQENSEEPRRNLIEYARSCGLEMKVEEKSFEELVTELKKLNKRGGNLKRDFLIFNCMVGLAHMGRGRSRRSVMEFLNLGKNMINKNTFNRGIISFGDGEADEKLRNSLNFRSFFDGNMMHYKALMESIESNFPACFLQARTAIEFLFVGPFVSSGVWMKKWEELRGNHHFLARNGFGIEGRRLSEEILMEAREILRGSRGGSYEARIEGQNGNEMVLLWKGTQLVKVSTWGSQKA 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00135 534 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 144 523 IPR005202 -
Accr16g00135 534 Pfam GRAS domain family 162 529 IPR005202 -
Accr16g00135 534 ProSiteProfiles GRAS family profile. 151 530 IPR005202 -
Accr16g00135 534 Coils Coil 322 349 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00135 142 529 GRAS Transcription Factor Family AT5G66770 25.245 7.52e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr16g00135 GRAS 7.1e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00135 - - pcin:129291421 469.544