LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr16g00134	ATGATGCATCGTCCCACTCTTCTCCAGCCCTCCACCTGGTCATTCCCCATTGACTTAACCTCGATTTTTGATACTTTCAATCCTTCCTCCCCCTTCTTCTTTGAAGATGATCATTTCCAATTCCCAGTTGAAATGATGGGATCAGAAGCATCCAAATCCATAGAGAATTCTTCCTTCAATGAACTTGAAGTTTCTTATGTCTTCTCTCAAGACAATTGCCTGTACCCAGCTAATGAAGAAGATATTCTGGGAATGGATTTGGGTGCTCTTGACCCTGATTGGAGTACCCAGTTTCTGAATATCCATGGAAGCCCAGAAGAAAGTGAAGAAAGTTTTCATCTTTCCCAGAATCTATCTTGTGAAGCAGAAGATTCCTGGGGTTCTAGTCCATGCATGAAATCATCAGAATATTCCTCTCTTCAACCAACATCACTTAACTTTCCTCAAGAAGACATGGAAATGGATACCCAAGTGATTCTTCCCCATCTCCTAGAAGCCCATGTTGAAGCAAAAGATCAGAACCAGAACGCACTTGTAGAAGAAACCTTGAGATGCATAAACCAGAAAACAAGCCCACTGGCAGAGGATCCTACGGAACGCCTAGCATTTCACTATTCTTCCCAAAACATTACTGGAAATCCACAGGGGCATCTTCTCAAACAGGAGGCGTGCAAAAGTTTTGATACCGCATTCAAGGTACTTTACCAAAGCACGCCCCATGGAAGACTCGCTCATTTTGTAGCGAATTCAGCAATTCTAGAAGCCATACCAGAGGATTCAGAAGCTGTACACATAATAGAATTTGATTTTGGAGAAGGGGTTCAGTGGGCCCCTGTGATAGAGGCCATTTCTCAACAGAACAAAGCAGTGAAGTTCACAATAATCAAATGGGAAAAAGAGCAAGAAAACTCTGAGGAACCCGGAAGGAACCTTATTGAGTACACAAGATCATGTGGTCTCGAGATGAAGGTAGAAGAAAAGAGTTTTGAGGAATTAGTTACAGAGTTCAAGAAATTGAACAAAAGAGGAGGAAATTTAAAAAGAGATTTCTTAATCTTTAACTGCATGGTGGGTCTTGCTCACATGGGGAGAGTAAGAAGCAGAAGATCAGTCATGGAATTTCTGAATTTAGGCAAGAACATGATCAACAAGAACACCTTCAACAGGGGGATTATCACTTTTGGGGATGGAGAAGCCGACGAAAAACTGAGAAACAGTCTGAATTTCAGGTCATTCTTTGACGGTAATATGATGCATTACAAGGCATTAACTCAATCAATTGAATCAAATTTCCCAGCTTGTTTCTTACAAGCAAGAACAGCAATAGAGTTCTTATTTGTGGGACCCTACGTGTCTTCCGGTGTTTGGATGAAGAAGTGGGAAGAATTGAGAGGAAATAACCATTTTATGGCAACGAATGGATTTGGTATAGAAGGAAGAAGATTAAAAGAAGAGATTTTAATGGAAGCGAGGGAAATATTGAGAGGAAGCAGGGAGGAGGTATCGTATGAGGCAAGGATTGAAGGGCAAAATGGGAATGAAATGGTTCTCTTATGGAAAGGGACCCAGTTAGTCAAACTGTCAACGTGGGGAAGTCAAAAGGCCTAA	1608	0.4142	MMHRPTLLQPSTWSFPIDLTSIFDTFNPSSPFFFEDDHFQFPVEMMGSEASKSIENSSFNELEVSYVFSQDNCLYPANEEDILGMDLGALDPDWSTQFLNIHGSPEESEESFHLSQNLSCEAEDSWGSSPCMKSSEYSSLQPTSLNFPQEDMEMDTQVILPHLLEAHVEAKDQNQNALVEETLRCINQKTSPLAEDPTERLAFHYSSQNITGNPQGHLLKQEACKSFDTAFKVLYQSTPHGRLAHFVANSAILEAIPEDSEAVHIIEFDFGEGVQWAPVIEAISQQNKAVKFTIIKWEKEQENSEEPGRNLIEYTRSCGLEMKVEEKSFEELVTEFKKLNKRGGNLKRDFLIFNCMVGLAHMGRVRSRRSVMEFLNLGKNMINKNTFNRGIITFGDGEADEKLRNSLNFRSFFDGNMMHYKALTQSIESNFPACFLQARTAIEFLFVGPYVSSGVWMKKWEELRGNNHFMATNGFGIEGRRLKEEILMEAREILRGSREEVSYEARIEGQNGNEMVLLWKGTQLVKLSTWGSQKA	535

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr16g00134	535	Pfam	GRAS domain family	162	530	IPR005202	-
	Accr16g00134	535	Coils	Coil	322	342	-	-
	Accr16g00134	535	ProSiteProfiles	GRAS family profile.	151	531	IPR005202	-
	Accr16g00134	535	PANTHER	OSJNBA0084A10.13 PROTEIN-RELATED	142	524	IPR005202	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr16g00134	142	530	GRAS Transcription Factor Family	AT5G66770	25.183	1.12e-13	71.6

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRAS	Accr16g00134		GRAS	1.2e-33	CL0063

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr16g00134	-		-	pcin:129291421	477.633