Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00133 ATGCTTGGGCTCACCAACACATCCAACGACATTGTGGGCCGTGCTTTCTATAACGAAAGGATTCCAATGTTAAACAATAGCTCAGACCCACGACGTCAAAAAGCTTCTTCCTTTAGCACACACTTTGTTTTCTCCATCGTCCCTTCCTCAACCTCTGCTCCCGGCGGCTTTGGCCTTGCTTTCGTCCTAGCATCAAGTATCGACAAGTTTCGAGACGCTCAAGCTGGGCACTTCCTTGGTATTTATAGCGGTTCCAATGGTGTGAATGTCACTCACATGTTCGCAATGGAATTTGATACGGTGAATGGCTCGGACCAAGTTGAGTCAGACACAGAAGCGAACGACGTTGGGATCAATGTTAATGGAACAGAGTCAGATATCTCTGAACGATCTGCTTACATTGGGACAGATTCTAAATGGGTTAATTTAAGTATGGAGCAATCTGAAGCCGTGCAAGCTTGGATAGATTATGACGGCGACAACAAAACCGTGAACGTGACCGTGGCTCCAACAGAGCCTAAACCTTCCACACCACTTATATTAAAGCATCGGGTTAATCTTACCACTGTTCTAACCGAATACATGTATGTCGGTTTCTCTGCATCAACAGGGGAAGGTAAAGCAAGCTCTCATTACATTCTGGGATGGAGTTTTGCAGTCAATGAACCTGCTCGTCCTCTTGACCTTTCCAAGCTTCCAAATCCACCACCAAAAGTGAAAGATCGTTCCTCTTTTCCATGGGTCAAGATTGCCATTGGAGTTTTATCTGCTTTAACCTTAATATTGTTGCTTTCGTTGTGTTCTGTAACATTGTACAAGAGGTACACTTATTTTGAACCTATTGAGGATTGGGAGCTGGATTGTCCTCACAGATTCAGATACAGAGATCTTCACATAGCAACCAAAGGTTTCAAGGAGAGTGAGCTAATTGGAGTTGGTGGCTTTGGTGCTGTGTACAAAGGTGTCTTACCTTCCACTGCAACTGAGGTTGCTGTGAAGAGGATTGTACGGAGCTCAATCCAAGGAATGAGAGAATTTGCAGCAGAAATTGAAAGCTTAGGAAGATTAAGACACAAGAATTTAGTCAATCTTCAAGGATGGTGTAAGAAGAAAAACGATCTTCTTCTCATCAATGACTACATCCCTAAAGGAAGCCTTGACTCACTCCTCTTCAAGCCAAACCTTGTTTTGAACTGGGAACAAAGGTTCAATATCATTAAAGGCATAGCTAATGGACTACTGTATCTTCATAAAGAGTGGGAGCAAGTGGTGGTCCACAGAGACATCAAAACCGGCAATATCCTTATAGATTCAGATTTAAATGCTCGTTTGGGTGATTTTGGCCTAGCTAGGCTATATCGTCATGGTGAGCAATCACATACAACCAATGTGGTGGGGACGATTGGGTATATAGCACCAGAATTGACGCGCACAGGAAAGGCATCCCCAAGCTCTGATGTGTATGCTTATGGTGTTTTGCTTCTTGAAGTTGTGAGTGGGAAGAGACCAATTGGGTCAGAGCAATTCTTTTTAGTGGATTGGGTTGTGGAGAATCACAATTTCGGTCAGATTCTTGAAGTGGTTGATCCTAAGTTGGAGTCATTATATGTTGAGGAAGAGGTGGAATTGGTTCTGAAACTAGGTCTTCTGTGTGCTCAGCATAAAGCAGATTCAAGACCCACCATGAGACAAGTGATGAGATACCTAAATTTTGATGACCCTCTTCCAGATATTGGGGATTGGAGGAGACAGACAGATTCAGATAGTGGAAGAATGAGCCTGGGTTTCTTAGAAATTGTATCTACGAGTACTTCCTCAACTTCATACAACTTAACCTCTAATAGTAGCGATATAAATAGTAGGCCTAGTCAAGCTTGTAGATAG 1884 0.4305 MLGLTNTSNDIVGRAFYNERIPMLNNSSDPRRQKASSFSTHFVFSIVPSSTSAPGGFGLAFVLASSIDKFRDAQAGHFLGIYSGSNGVNVTHMFAMEFDTVNGSDQVESDTEANDVGINVNGTESDISERSAYIGTDSKWVNLSMEQSEAVQAWIDYDGDNKTVNVTVAPTEPKPSTPLILKHRVNLTTVLTEYMYVGFSASTGEGKASSHYILGWSFAVNEPARPLDLSKLPNPPPKVKDRSSFPWVKIAIGVLSALTLILLLSLCSVTLYKRYTYFEPIEDWELDCPHRFRYRDLHIATKGFKESELIGVGGFGAVYKGVLPSTATEVAVKRIVRSSIQGMREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLLINDYIPKGSLDSLLFKPNLVLNWEQRFNIIKGIANGLLYLHKEWEQVVVHRDIKTGNILIDSDLNARLGDFGLARLYRHGEQSHTTNVVGTIGYIAPELTRTGKASPSSDVYAYGVLLLEVVSGKRPIGSEQFFLVDWVVENHNFGQILEVVDPKLESLYVEEEVELVLKLGLLCAQHKADSRPTMRQVMRYLNFDDPLPDIGDWRRQTDSDSGRMSLGFLEIVSTSTSSTSYNLTSNSSDINSRPSQACR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00133 627 Gene3D Phosphorylase Kinase; domain 1 289 380 - -
Accr16g00133 627 CDD lectin_legume_LecRK_Arcelin_ConA 2 221 IPR001220 GO:0030246
Accr16g00133 627 Gene3D - 1 222 - -
Accr16g00133 627 ProSitePatterns Protein kinases ATP-binding region signature. 310 333 IPR017441 GO:0005524
Accr16g00133 627 Pfam Legume lectin domain 2 233 IPR001220 GO:0030246
Accr16g00133 627 SUPERFAMILY Protein kinase-like (PK-like) 288 573 IPR011009 -
Accr16g00133 627 SMART serkin_6 304 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00133 627 PANTHER - 10 571 - -
Accr16g00133 627 Pfam Protein kinase domain 304 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00133 627 CDD STKc_IRAK 310 570 - -
Accr16g00133 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Accr16g00133 627 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 237 IPR013320 -
Accr16g00133 627 Gene3D Transferase(Phosphotransferase) domain 1 381 573 - -
Accr16g00133 627 FunFam L-type lectin-domain containing receptor kinase S.4 381 581 - -
Accr16g00133 627 FunFam Lectin-domain containing receptor kinase VI.3 289 380 - -
Accr16g00133 627 ProSiteProfiles Protein kinase domain profile. 304 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00133 627 MobiDBLite consensus disorder prediction 606 627 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00133 1 595 Receptor kinase-like Gene Family AT5G01560 50.984 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr16g00133 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00133 - - gmx:100791358 775.007