Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00132 ATGGCTTCATCATCATCAGAGCTTGGTTTTGTTTTTCTCCTTCTCTTTCTTTCTCTTCTAGTTGCATCCAAGCCTCAACAAGATTCCAACTTTTTATTTGAGGGATTCAATAACAGTGAAAATCATCTAAACCTTGAAGGAGCTACAGTTGTGAAACCCAGTGGTTCCCTTAAACTCACCAACAGATCATACAATATTGTAGGCCATGCTTTCTATTACAAACCCTTTCAGATGCTTGTTAACACAACCAACACAACCAAAATACTAAAAGTTTCTTCCTTTAGCACATCCTTTGTTTTCTCCATTGTTCCTTCTTCCTCTGGCCCTGAAGGCTTTGGCCTTGCTTTTGTCATAGCTCCCTCAACTCAATTTCCATGGTCAAGCCCTGGCCATCTTCTTGGTCTAGTTAACTCCTCCAATGATGGCAGTCCTTCAAATCACCTTTTCGTAGTCGAATTTGATACGGTAAATGGCTACAGAAGTCAGGCTGACAGTAAAGGAAACCATGTTGGGGTCAATATAAATGGCATGAACTCAACCGTTAACGAACCGGCTGCTTTTTTTATAGAAGGCACAGAAGCTCAGAAGGAAGAATTTAGCATGGAGGAATCTGATGCTGTACAAGCTTGGATAGATTATGATGGTGAAAAGAAAATTGTGAATGTGACTATAGCTCCTATATCATTGCCTACTAAACCCTCCAAACCACTCATATCTCATCCTATTGACCTTCATGAGGTTCTGAAGGAATCCATGTTTGTTGGTTTCTCAGCTTCAACTGGGGAAAGTAAAGCAAGCTCTCATTACATTCTTGGATGGAGCTTTTCATTGAATGGTCCTTCTGCTGAACTCAACAGTTCCAGGCTTCCAGAGCCACCAACAAAGGAGAATGATCCAAGTTCAACTTCTTTCCCTTGGATCAAACTTGCTGTTGCAGTGCTATCTGCTCTGATCCTACTATTAATTTTTTCCTTGTGTTCGTTAACTTTGTACAGGAGGTACAACAACTTTGAGAATCTTGAGGATTGGGAACTAGATTGTCCTCACAGATTCAGATACAGAGATCTTCATGTGGCAACAAAAGGATTCAAAGAGAGTGAGCTAATAGGAATTGGAGGTTTTGGTGTAGTGTACAAAGGTGTCTTGGCTTCCACAGGAACTGAAGTTGCTGTGAAGAGGATTGTACGAGGTTCAATCCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGGAGATTAAGACACAAAAACTTGGTCAATCTTCAAGGATGGTGTAAGCGAAAAAATGATCTTCTTCTGGTCTATGATTATATCTCCAATGGAAGCCTTGACTCACTCCTCGTCAATCCAAGCGTTGTTCTGAGTTGGGACCAAAGATTCAATATCATCAAAGGCATAGCTAATGGACTATTGTATCTTCATGAAGAGTGGGAGCAAGTGGTGATCCACAGAGACATCAAAACAGGAAATATTCTCATAGATGAAGATTTAAATGCTCGTGTGGGTGATTTTGGCCTAGCCAGGCTGTATGATCATGGTCAAGTATCTCACACAACTAATGTTGTTGGTACAATTGGGTATATAGCACCAGAATTGACTCGTACGGGAAAGGCATCCACAAGCTCTGATGTGTATGCTTATGGGGTTTTGCTTCTTGAAGTTGTTAGTGAGAGGAGACCTATTGATGAGTCAGGACAGTTTGTCTTGTTAGACTGGGTTGTGGAGAATCAAAGCTTGGGTCAGATTCATGACGTTGTTGACCCAAAGTTGAATTTAAACTATGATGAAGAAGAGGTGGAATTGGTTCTGAAACTGGGTCTTCTCTGTGCTCAACACAGAGCAGATTTAAGACCCACCATGAGACAAGTTATAAGATATCTGAACTTTGATGATCCTATTCCAGTTACTGGGGCTGAAAGTAGCAGAATGAGCTCAGGTTTCCTGGAAGTTGTGTCTGCAAGTACTATATCAGCTTCCTATAACTTATCTTCCATTAATAGTATGAGTAGTAGGCTTGTAGAAGCTGGTAGGCAGCCATGTACATGTTAA 2055 0.4097 MASSSSELGFVFLLLFLSLLVASKPQQDSNFLFEGFNNSENHLNLEGATVVKPSGSLKLTNRSYNIVGHAFYYKPFQMLVNTTNTTKILKVSSFSTSFVFSIVPSSSGPEGFGLAFVIAPSTQFPWSSPGHLLGLVNSSNDGSPSNHLFVVEFDTVNGYRSQADSKGNHVGVNINGMNSTVNEPAAFFIEGTEAQKEEFSMEESDAVQAWIDYDGEKKIVNVTIAPISLPTKPSKPLISHPIDLHEVLKESMFVGFSASTGESKASSHYILGWSFSLNGPSAELNSSRLPEPPTKENDPSSTSFPWIKLAVAVLSALILLLIFSLCSLTLYRRYNNFENLEDWELDCPHRFRYRDLHVATKGFKESELIGIGGFGVVYKGVLASTGTEVAVKRIVRGSIQGMREFAAEIESLGRLRHKNLVNLQGWCKRKNDLLLVYDYISNGSLDSLLVNPSVVLSWDQRFNIIKGIANGLLYLHEEWEQVVIHRDIKTGNILIDEDLNARVGDFGLARLYDHGQVSHTTNVVGTIGYIAPELTRTGKASTSSDVYAYGVLLLEVVSERRPIDESGQFVLLDWVVENQSLGQIHDVVDPKLNLNYDEEEVELVLKLGLLCAQHRADLRPTMRQVIRYLNFDDPIPVTGAESSRMSSGFLEVVSASTISASYNLSSINSMSSRLVEAGRQPCTC 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00132 684 Gene3D - 27 286 - -
Accr16g00132 684 Pfam Protein kinase domain 363 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00132 684 ProSiteProfiles Protein kinase domain profile. 363 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00132 684 FunFam Lectin-domain containing receptor kinase VI.3 348 439 - -
Accr16g00132 684 Pfam Legume lectin domain 29 289 IPR001220 GO:0030246
Accr16g00132 684 Gene3D Phosphorylase Kinase; domain 1 348 439 - -
Accr16g00132 684 CDD STKc_IRAK 369 630 - -
Accr16g00132 684 SUPERFAMILY Protein kinase-like (PK-like) 347 634 IPR011009 -
Accr16g00132 684 CDD lectin_legume_LecRK_Arcelin_ConA 30 279 IPR001220 GO:0030246
Accr16g00132 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Accr16g00132 684 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Accr16g00132 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 294 IPR013320 -
Accr16g00132 684 SMART serkin_6 363 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr16g00132 684 FunFam L-type lectin-domain containing receptor kinase S.4 440 642 - -
Accr16g00132 684 Gene3D Transferase(Phosphotransferase) domain 1 440 634 - -
Accr16g00132 684 FunFam L-type lectin-domain containing receptor kinase V.9 28 280 - -
Accr16g00132 684 PANTHER - 22 631 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00132 29 636 Receptor kinase-like Gene Family AT3G08870 52.350 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr16g00132 Pkinase 6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00132 - - gmx:100792854 837.41