Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00128 ATGGATACTATTCCGTTGGCATACCAAGAGCACCTCCCTGCTTCTCCTTATTGGCTAAACAAAGGAGATAATGGATGGCAAATGACGGCAGCTACACTAGTAGCCATCCAAAGCATGCCAGGGCTTGTGATTCTGTACGCAAGCATCGTCAAGAAGAAATGGGCTGTAAATTCAGCTTTCATGGCTCTTTATGCCTTCGCTGCTGTACTCATTTGTTGGGTCCTTGTTTGTTTCAGAATGGCCTTTGGAGATGAACTCCTTCCCTTTTGGGGTAAGGGTGCCCCAGCTTTGGGTCAAAATTTCCTCTTAAAGCAAGCTAAGGTCCCTGAAACTGCTCATTATCACAAAAATGGAACTTTAGAAGCCCCAGCCGCACAGCCACTTTTTCCCATGGCTACACTTGTGTATTTTCAATTCACTTTTGCTGCCATCACAATGATCTTGTTAGCTGGTTCGGTTCTTGGTCGCATGAACATTAGGGCCTGGATGGCTTTTGTCCCTCTTTGGCTCATTTTCTCATACACCGTTGGGGCATTCAGCTTATGGGGCGGTGGCTTCCTCTACCAGTGGGGCGTCATCGATTACTCCGGCGGCTACGTTATCCACCTCTCCTCTGGAACCGCCGGCTTCACTGCCGCGTATTGGGTGGGACCGAGGCTGAAGAGCGACAGGGAGAGGTTTCCACCGAACAATGTGCTGCTGATGCTTGCAGGGGCGGGACTTCTATGGATGGGGTGGTCGGGGTTCAATGGCGGAGCACCGTACGCGGCGAGCATTGACTCGTCAATAGCAGTGCTGAACACCAACATATGCGCGGCGACGAGCCTTCTGGTGTGGACGTCACTGGATGTCGTCTTCTTCGGGAAGCCTTCGGTGATCGGAGCCGTTCAGGGCATGATGACCGGACTTGTTTGCATCACCCCCGGGGCAGGGTTGGTGCAATCGTGGGCGGCGATAGTAATGGGAATCCTCTCGGGAAGCATTCCATGGTTCACCATGATGATCCTTCACAAAAAGTCTTCTCTCCTTCAAAAGGTAGATGACACCCTCGGAGTATTTCACACACACGCGGTGGCGGGGCTTTTGGGTGGCCTCCTCACTGGTCTGTTGGCGGAGCCTGAGCTTTGCCGGTTGGTCTTGCCGGTGACTAACTCAAGGGGCGCCTTCTATGGCGGCAACGGCGGCATTCAGTTCTTGAAGCAGATTGTGGCCGCCCTATTCGTGGCCGGATGGAACTTGGTGTCCACCACTCTCATTCTTCTAACCATTCGTTTGTTCATACGGTTGAGGATGCCGGACGAGCAGCTAGAGATCGGTGATGACGCCGTGCACGGTGAGGAGGCCTATGCACTCTGGGGCGACGGAGAGAGATATGAACCTAACAAGCATGGTTCCTCTGACAATCATGCTTCGGCAGTTTCACCTTATGTGACTGGAGCAAGAGGCGTCACCATAAATTTATAG 1464 0.5253 MDTIPLAYQEHLPASPYWLNKGDNGWQMTAATLVAIQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVCFRMAFGDELLPFWGKGAPALGQNFLLKQAKVPETAHYHKNGTLEAPAAQPLFPMATLVYFQFTFAAITMILLAGSVLGRMNIRAWMAFVPLWLIFSYTVGAFSLWGGGFLYQWGVIDYSGGYVIHLSSGTAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAASIDSSIAVLNTNICAATSLLVWTSLDVVFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWFTMMILHKKSSLLQKVDDTLGVFHTHAVAGLLGGLLTGLLAEPELCRLVLPVTNSRGAFYGGNGGIQFLKQIVAALFVAGWNLVSTTLILLTIRLFIRLRMPDEQLEIGDDAVHGEEAYALWGDGERYEPNKHGSSDNHASAVSPYVTGARGVTINL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00128 487 ProSitePatterns Ammonium transporters signature. 194 219 IPR018047 GO:0008519|GO:0016020|GO:0072488
Accr16g00128 487 Pfam Ammonium Transporter Family 26 449 IPR024041 GO:0008519|GO:0016020|GO:0072488
Accr16g00128 487 SUPERFAMILY Ammonium transporter 18 431 - -
Accr16g00128 487 PRINTS Rhesus blood group protein signature 357 373 IPR002229 GO:0005886
Accr16g00128 487 PRINTS Rhesus blood group protein signature 319 337 IPR002229 GO:0005886
Accr16g00128 487 PRINTS Rhesus blood group protein signature 264 286 IPR002229 GO:0005886
Accr16g00128 487 PRINTS Rhesus blood group protein signature 138 154 IPR002229 GO:0005886
Accr16g00128 487 PRINTS Rhesus blood group protein signature 233 251 IPR002229 GO:0005886
Accr16g00128 487 NCBIfam ammonium transporter 23 449 IPR001905 GO:0008519|GO:0016020|GO:0072488
Accr16g00128 487 FunFam Ammonium transporter 7 452 - -
Accr16g00128 487 Gene3D Ammonium transporter AmtB like domains 6 452 IPR029020 -
Accr16g00128 487 PANTHER AMMONIUM TRANSPORTER MEP2 11 460 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00128 131 487 Inorganic Solute Cotransporters AT2G38290 76.602 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00128 K03320 - gmx:100790119 849.736