Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00125 ATGGAGTACAGCATTCCTCCTTCCAGCAACCTTACCTCATCAAGAGCGATATCTTCGAAGGCGAAGAAAAAGAGCGGGAATAAGAAGAGCAATGGAGGCGTGAAGCTTTCGACTGATCCACAGAGCGTGGCAGCTCGAGAACGAAGGCATCGAATTAGTGATCGGTTCAAGATCTTGCAGAGCATGGTCCCTGGTGGGAGTAAGATGGACACAGTGTCGATGTTGGAGGAAGCTATTCATTACGTGAAGTTTCTGAAAACTCAGATTTGGCTTCACCAAACCATGATTAACTCTGTTGACGATGACTACCTTTCATTTCCCAACAATGAACAGTTTCCTCCTCTGCAACAAAACGCGTCATCTTCTTCTTCTGTGGGTTCTGTGCAGAATTTGACACACATACCTCTGCAGCAACATTGCTGCTTTCAAAATGAAGTTGCAACAATATTGGACGCTAATATGAACTATTGGCCAGCTTAG 480 0.45 MEYSIPPSSNLTSSRAISSKAKKKSGNKKSNGGVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINSVDDDYLSFPNNEQFPPLQQNASSSSSVGSVQNLTHIPLQQHCCFQNEVATILDANMNYWPA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00125 159 FunFam Transcription factor LAX PANICLE 39 102 - -
Accr16g00125 159 MobiDBLite consensus disorder prediction 1 20 - -
Accr16g00125 159 MobiDBLite consensus disorder prediction 1 49 - -
Accr16g00125 159 CDD bHLH_AtIND_like 37 96 - -
Accr16g00125 159 Gene3D - 41 94 IPR036638 GO:0046983
Accr16g00125 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 96 IPR036638 GO:0046983
Accr16g00125 159 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 36 85 IPR011598 GO:0046983
Accr16g00125 159 Pfam Helix-loop-helix DNA-binding domain 46 85 IPR011598 GO:0046983
Accr16g00125 159 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 14 139 IPR045843 GO:0003700|GO:0006355
Accr16g00125 159 SMART finulus 42 91 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00125 34 106 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 54.795 3.15e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr16g00125 HLH 4.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00125 - - gmx:113001230 160.999