Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00121 ATGGACGTCGACGAAACTTCTAAACCCAATGAGGAAAAGCTCTTATTGGTCATGTTAGTGGGAGCACCAGGGAGCGGCAAGTCCACTTTCTGCGAAGAAGTTATGCGTTCTTCTACTCGTCCTTGGGTTCGCGTTTGCCAGGATATCATTAAAAATGGAAAAGCAGGAAATAAAGCGCAGTGTCTAAGCAGTGCAGCTGAAGCATTGAAGGATGGAAAGAATGTATTTATTGACAGATGCAATCTTGATAGAGAACAGCGTTCAGGATTCACAGAGCTTGGTGGACCCCAAATAGATGTTCATGCCATTGTGCTTGATCTTCCTGCAAAGCTTTGTATTTCTCGAACTGTCAAACGATCTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCTGTGGTGAATAGAATGCTTCAGAAGAAAGAGCTGCCTACGTTAAGTGACGGGTTTAACCGGATAACATTTTGTCAAACTGAGAGTGATGTCAAAGTGGCTATTGACACTTACAGTGCACTTGGGCCGCTGGATAATCTTCCATATGGATGTTTTGGCCAAAAAAGTAAAGAGGCCAAAGTTCAAGTGGATATAATGAAGTTCTTCAAAAAGGCTGAGGCCCCAGTTGTTGCTGAGTCTACAGAGAATTGCAGCAGAAATTTTACTTCTCAAAATAATGAGATGATGGACCCCTGCAATAAAGATATCGAAATTTTTTCATCAAATTCAGATAAAGCCAACTTAGAGCCAATGAACGTTGAAACTATCTCAGAAGGATCCACTGTTTCTCATGGTGATAATGCTTTCATGGGTGATGTTCCCACTCTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTTGACCATGAGAAGGCAGCTGAGATTATTGTGGAGAAAGTTGCAGAGTTCTCAAATAAGCTTGTGAATGTTAGATTTGTTTTAGTTGACTTGAGTCGTGGTTCAAAGATTCTGTCTTTAGTTAAAGCCAAAGCTGCCAAAAAACACTTAGACCCTAGAAAGTTTTTTACCCATGTTGGTGACATTACCTGCCTTAGGTCCAAAGGAGGCTTGCACTGTGCTGTGATAGCTAATGCTGCCAACTGGCGATTGAAACCTGGAGGGGGAGGGGTTAATGCTGCAATCTTCAAGGCTGCAGGTCCTGCCTTGGAGTCTGCAACCAAAGAACGGGCAGAATTGCTTTTGCCTGGGAATGCTGTTGCTGTCCCTCTACCATCATCTTCTCCTTTGTTTACTAGAGAGGGAGTAACCCATGTAATACATGTTCTTGGACCAAATATGAATCCACAAAGGCCAGATTGTCTTAATAATGATTACAATAAAGGCTGCAAGATTCTCAGAGAGGCTTACACTTCACTATTTGAAACTTTTGCATCAATCGTGAGGACTGGGACAGAGCAAAAGAGCAAGAGAGATGCTGATCATGGATCAGAAAAAAGCAAGAAATACAAGGGAAGTCAGGATGATGTTGAACTTAACTGTACTGGTACCAAGGTTGTAAACATAGATTCAAGTAATAAAAAAAGTGATGGCAGCTTGAATAAGGCATGGGGATCATGGGCTCAAGCTCTTCATCAAATAGCTATGCACCCTGAGAAGCATAAGGATGAATTGCTTGAAATATCCGAAGATGTGGTTGTGCTGAATGATCTGTATCCTAAGGCAAAGAAGCATGTTTTGGTGTTGGCACGAACTAAAGGCCTCGATTGTCTGGCTGATGTTCAAAATGACCACCTTCACTTGCTAAGGAGGATGCATGATGTGGGTCTAAAGTGGGCCGAGAAGTTCTTACATGAGAATGCTTCATTAGTTTTTCGTCTTGGATATCACTCGGCTCCATCAATGCGACAACTTCATTTACATGTTATTAGCCAGGACTTTGACTCAAAACATTTGAAGAACAAGAAGCATTGGAACTCATTCAACACTGATTTCTTCCGTGACTCGGTAGCTGTAATTGATGAGGTCTCTAATTATGGGAAAGCAATCTTGAGAGATGATGACAAATTGCTGTCCATGGAGTTGAGGTGCCATAGATGTAGAAGTGCACACCCTAACATTCCCAGGTTAAAATCTCATATTAGCAGTTGTAAAGCTTCCTTTCCTACTTTCTTGCTTCAAAATGGCCGTTTGGTTCGCACACAAGGTGAAGTGAACATCAGTTCATAA 2187 0.4188 MDVDETSKPNEEKLLLVMLVGAPGSGKSTFCEEVMRSSTRPWVRVCQDIIKNGKAGNKAQCLSSAAEALKDGKNVFIDRCNLDREQRSGFTELGGPQIDVHAIVLDLPAKLCISRTVKRSGHEGNLQGGKAAAVVNRMLQKKELPTLSDGFNRITFCQTESDVKVAIDTYSALGPLDNLPYGCFGQKSKEAKVQVDIMKFFKKAEAPVVAESTENCSRNFTSQNNEMMDPCNKDIEIFSSNSDKANLEPMNVETISEGSTVSHGDNAFMGDVPTLAFPSISTSDFQFDHEKAAEIIVEKVAEFSNKLVNVRFVLVDLSRGSKILSLVKAKAAKKHLDPRKFFTHVGDITCLRSKGGLHCAVIANAANWRLKPGGGGVNAAIFKAAGPALESATKERAELLLPGNAVAVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPDCLNNDYNKGCKILREAYTSLFETFASIVRTGTEQKSKRDADHGSEKSKKYKGSQDDVELNCTGTKVVNIDSSNKKSDGSLNKAWGSWAQALHQIAMHPEKHKDELLEISEDVVVLNDLYPKAKKHVLVLARTKGLDCLADVQNDHLHLLRRMHDVGLKWAEKFLHENASLVFRLGYHSAPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTDFFRDSVAVIDEVSNYGKAILRDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCKASFPTFLLQNGRLVRTQGEVNISS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00121 728 Pfam Scavenger mRNA decapping enzyme C-term binding 531 643 - -
Accr16g00121 728 SUPERFAMILY Macro domain-like 327 461 IPR043472 -
Accr16g00121 728 FunFam Transcription factor bHLH140 321 468 - -
Accr16g00121 728 SUPERFAMILY Macro domain-like 272 316 IPR043472 -
Accr16g00121 728 Pfam Macro domain 363 438 IPR002589 -
Accr16g00121 728 Gene3D - 525 707 IPR036265 -
Accr16g00121 728 MobiDBLite consensus disorder prediction 471 494 - -
Accr16g00121 728 SMART YBR022w_8 340 479 IPR002589 -
Accr16g00121 728 MobiDBLite consensus disorder prediction 470 494 - -
Accr16g00121 728 Gene3D Leucine Aminopeptidase, subunit E, domain 1 325 467 IPR043472 -
Accr16g00121 728 FunFam aprataxin isoform X2 524 704 - -
Accr16g00121 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 159 IPR027417 -
Accr16g00121 728 ProSiteProfiles Macro domain profile. 328 566 IPR002589 -
Accr16g00121 728 PANTHER APRATAXIN-RELATED 275 703 - -
Accr16g00121 728 SUPERFAMILY HIT-like 523 687 IPR036265 -
Accr16g00121 728 ProSitePatterns HIT domain signature. 612 630 IPR019808 -
Accr16g00121 728 Gene3D - 2 170 IPR027417 -
Accr16g00121 728 Pfam AAA domain 16 141 - -
Accr16g00121 728 Gene3D Leucine Aminopeptidase, subunit E, domain 1 267 324 IPR043472 -
Accr16g00121 728 FunFam Transcription factor bHLH140 4 172 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00121 5 718 C2H2 Transcription Factor Family AT5G01310 60.276 0.0 875