Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00104 ATGAAGACCCGGCATTTATCTTTATGGATAATATTTATGATTTTTATGGGTTTTCATGCAAGCTTGGAAGCGAAAACTATCGATCCTTACCAGGTCCTTGGGGTTGATAAAAATGCAAGTCAACGGGAAATTCAGAAGGCTTTCCACAAGCTCTCTCTCCAGTATCACCCAGACAAGAACAAAAACAAGGGTGCACAGGAGAAGTTTTCCCAAATCAATAATGCATATGAGATTTTGTCTGACGAACAGAAAAGGAAGAATTACGACATGTATGGTGATGAGAAAGGCGATCCTGGATTTGGAGCTGGTGATCCTGGAGATCAGAGTGGATATACTTATTTCACAAGTGGCGGACAAGGACAAAGTCAGTTTAATTTCAGACCGGGGCAATGGCAGGATATGGGTGGGCAAGGAGGTTCTCAGTCATTCTCCTTTTCCTTCAGTGGATCTGGTGGTCCTAATTTGTTTGGATTTGGTTTGGATGATCTTTTTGGTGGTATGTTTAATGGTGGAGGGCGTGGTGGTGGGAGTAAGTTTGGTGGTTTTGAAAGTTCATATGGTTCTCAATTTGGATCTAAGAGTTCCCGTCAAAGTTTTAGAGCCATAAGTTCACACATCTTCAAGAAAGAAATAGTTGATCAAGGCATGACTTGGCTTTTGTTATCATATACACCCTCATCAAAGAGGCTCCAACACTTTGAATCCATTATAGAGGAGGTCGCTAGTTCAATGGAAGGAGCTATGAAGGTTGGAAGTATGGATTGTGGAAAGGAGGCCTCGTTCTGTCAGCAGCTTGGCATATATCCCCAAAGAGTTCCAAGGATTTTTGTTTATTCTTACAAGGGAAATGAAAAGGGTTCTTTGGTAGAGTACGGTGGTGACTTGGTTGCTAAGAATTTAAAGGCTTTCTGTCATGACCACCTGCCAAGATTTTCAAAGCGGACTGACATGAATTCTCTGGAAGCATTTATAGCTTCTGGAAAGTCGCCTGGGGTGATTCTTCTATCCTCTAAAAAAGACACTCCAGTAATTTGGCGTGTTCTCAGTGGCCTGTATCACAAGCGATTTACATTCAGTGATGTGCAGGTTCAAGATGTTTCTGATCCAAGAGTGAAAAAGCTGGGAGTTGATGCACTCCCGGCTATAGTTGGTTGGCTACTTAATGGAGAGAAGCGGATTCTGAAAACAGGGATTTCCGTAAAAGATATAAAATCTGCAGTTCATGATCTTGGTAATATGCTTGATAGTTTTGAAAAAGTAAGCAAAAAGGCAGCATCAAGTGAGGCCAAAAAAGCACCCACTGATTCAGATGAGACACAGACGCAATTACTTTCTCGATTGAACTTTGATGTTCTTTGTGGCGAGAGAACCCCAGTCTGCATAATTGGTGCCTTTAGATCCTCTAAAGCGAGAGAAAAGCTGCAAAAAATCCTGTCTTTGGTATCTCAGAAATCTTTCTCAAGGCAATCAAATCAAGCATCAGGCTCAAGGGACTCCATATCCTATGCCCTCTTGGATGCTACAAAGCAACCCTCCTTTCTTAAAGCATTTGATAAAACTGCATTTAAGTCATCAGATGTGTTCTTGATTGCCTACAAGCCTAAAAGAAGGAAGTTTACTTCCTTTCTGGGTGAAATGACGATGGAGAAAGTAGAGAACTTTATTACTTCAGTTCTAAGTGGAGATATACCTTTTAGGGAAACAAGAGAGAAGCCTGTACTAAAGTAG 1728 0.4132 MKTRHLSLWIIFMIFMGFHASLEAKTIDPYQVLGVDKNASQREIQKAFHKLSLQYHPDKNKNKGAQEKFSQINNAYEILSDEQKRKNYDMYGDEKGDPGFGAGDPGDQSGYTYFTSGGQGQSQFNFRPGQWQDMGGQGGSQSFSFSFSGSGGPNLFGFGLDDLFGGMFNGGGRGGGSKFGGFESSYGSQFGSKSSRQSFRAISSHIFKKEIVDQGMTWLLLSYTPSSKRLQHFESIIEEVASSMEGAMKVGSMDCGKEASFCQQLGIYPQRVPRIFVYSYKGNEKGSLVEYGGDLVAKNLKAFCHDHLPRFSKRTDMNSLEAFIASGKSPGVILLSSKKDTPVIWRVLSGLYHKRFTFSDVQVQDVSDPRVKKLGVDALPAIVGWLLNGEKRILKTGISVKDIKSAVHDLGNMLDSFEKVSKKAASSEAKKAPTDSDETQTQLLSRLNFDVLCGERTPVCIIGAFRSSKAREKLQKILSLVSQKSFSRQSNQASGSRDSISYALLDATKQPSFLKAFDKTAFKSSDVFLIAYKPKRRKFTSFLGEMTMEKVENFITSVLSGDIPFRETREKPVLK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00104 575 Pfam Thioredoxin-like domain 189 306 - -
Accr16g00104 575 SMART dnaj_3 27 84 IPR001623 -
Accr16g00104 575 CDD DnaJ 28 81 IPR001623 -
Accr16g00104 575 FunFam Molecular chaperone DnaJ 25 179 - -
Accr16g00104 575 SUPERFAMILY Thioredoxin-like 205 309 IPR036249 -
Accr16g00104 575 PRINTS DnaJ domain signature 84 103 IPR001623 -
Accr16g00104 575 PRINTS DnaJ domain signature 64 84 IPR001623 -
Accr16g00104 575 PRINTS DnaJ domain signature 48 63 IPR001623 -
Accr16g00104 575 PRINTS DnaJ domain signature 30 48 IPR001623 -
Accr16g00104 575 Pfam DnaJ domain 28 89 IPR001623 -
Accr16g00104 575 Gene3D DnaJ domain 17 98 IPR036869 -
Accr16g00104 575 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Accr16g00104 575 ProSiteProfiles dnaJ domain profile. 28 92 IPR001623 -
Accr16g00104 575 PANTHER DNAJ PROTEIN ERDJ3A 1 575 - -
Accr16g00104 575 Gene3D Glutaredoxin 195 315 - -
Accr16g00104 575 SUPERFAMILY Chaperone J-domain 18 96 IPR036869 -
Accr16g00104 575 CDD PDI_a_family 209 303 - -
Accr16g00104 575 Coils Coil 62 82 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00104 30 91 C2H2 Transcription Factor Family AT1G74250 41.176 1.11e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00104 - - gmx:100796871 736.102