Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00088 ATGGAGATTGTCAAGACCATTGCTGAAAAAGTTGCCGAACCGATAGTAGATTACATTGTGGCACCCATTGGAAGGCAAGCGAGTTATCTAATTTTCTACAAAGACAATTTCAAGAATCTCAAGGAACAATATACAGACCTGAAGAGAGTAAAGGGTACTATTAGTCATGACGTGGAAGTACAAAGAAAAAATGGACGACAAATTTATGATAGCGTACAAAATTGGCTGAGCAGAGTGGATGAAATCATAGAAGAAGCAGAGCAACTTAGTAATGATCCTCAACATAGGAATGTTGCTTGTTGTAAGGGGCCTTTTCCTAATTTCAAGTCACGCCATCAACTCAGTAGAAAAGCAAAGAAAATGGTTGGAAATGTTGCTGAAGTAATGCAACAAAAAGATTACATTGAATCGCTTGCACTCTTGCCTGATCTAGAAGGAGTAGGCTCCACTTTTGCTACAAGTAGTGAAAAGCTTGAGTCAAGAAAGAAAATGAAGGAGGACATTATGTTGGCTCTAACAGACCCCCACATAAGCCGAGTAGGGGTTTATGGGCTTGGTGGAATGGGGAAAAGCACTCTAGTCAAAGAAGTTGCTAAACAAGTTAAAAATGACAAACTGTTTGATAAAGTTGTTATGGCTAATATATCCCATGTTGCAGATCTTGAAAGAGTTCAACGTGAAATTGCAGATTTTTTGGGTCTTCGCTTTGAGGAGACGACCATAATTGGAAGAGCAGCTCGCCTCCGGCAGAGTATTAAAAGTGAGAGAAGTATCCTAGTCATATTGGATGATATTTGGGATATACTTGAATTAGATAAGTTGGGACTTCCTCTAAATGATCATAAGGGGTGCAAGCTATTGTTGATTTCTAGAAGACTAGATGTATTACAAAATATGGAGACTCAAAAAGATTTCTTGATAGATGTCTTAAATGAAGAAGAAACTTGGTGCTTGTTTGAAGATATGGTGGGTGATGTTGTTAAAGATGTTAACTTGCGTGGCGTGGCAATCCAAGTGGCCCAAAAATGTGCAGGCTTGATTGTTCTTATAGTGACAATTGCAAGAGCGTTAAAAAATGAAGATGATATTGATTGTTGGAAAGATGCCTTAAACCAGCTGAAGATTGTTGATGAGGGAGGAATGAGTGAGAAAGTCTATTCAGTTTTAGAGTATAGTTACAATCATCTTGATGGTGAGGACGTGAAGGCACTTTTCTTGCTTTGTGGATCAATAGGTCCACAAATTCCAGTTGAATACTTGTTAAAGTATGGTATGGGTTTAGGGATATTCAAACATATTAATACTATAAAAGATGTAAGACTAGAACTTCACAGGTTGATTGGTTCCTTAAAGGCGTCTTGTCTATTGCTTGAAAGCAGCTCTAACATGGAAGTTGAAATGCATGACATTGTACATGAAGTAGCAGTCTCAATTGCTTCAAGAGATCAACATGTTTTCAAAATTGGCATGGGTGGTGAGCTGAAAAAGTGGCCATCAGAGGAATTCCTTCAAAGATGCACTCAAATCATCTTACACTTGTGTCATATTCCTAAGCTTCCTGAAAGGTTAGAGTGTCCTAATATTCAACTTTTCTACTTGTATAATAAGAATGAATCTTTAAGTGTCCCATATTCTTTCTTTGCGGTAATGAAAAACCTCAAAGCGTTAGGTTTGACTTGCATGCACTTCCCTTTATTGCCCCAATCTTTTCATTCCCTTATTGACCTTCAAACACTTTGTTTGGATCAATGTGGTCTGGGAGACATGACCAATATTGGAGCTTTAAGGAATTTGCAAATTCTCAGCCTTTGTTCATCCTCTATGACAACGTTGCCTAGTGAACTAGGACAATTGATCCATCTTAGAATGTTGGATTTAACTAATTCTGGAATTGAAATCTTCCCTTCCAACATTATATCAAAATTGACCAAATTGGAGGAGTTGTATTTGGGCAATACCTCTATCAAGTGGGAACAAGAAGATTCAGATGAGGAAAATAAAAATGCCTCCCTTAGTGAGCTTAGTCATTTGACAAACTTGATAGCTCTAGAAATTCAAATCAAAGGGGCTTGGGTTCTACCAAGGGACATAATGTTTGACAAATTGGAAAGATACAAAATAGTGATAGGAGATGTATGGGAGTGGTCTGATAATTATGGGGCCCCCAAAATGTTGAAGCTCAAACTTAGTACTATTATTCATTTGGAGCATGGGATTAAAGAACTTATTAAAGGGGTGGAGGATTTGTACTTGGATGAAGTGCATGGAATCTCCAATGTGCTTTATGATTTGAATGGAGAAGGATTTCCTTTGTTAAAGCATCTTCACATCCAAAACAATGGGAAAATTCAACACATCATCAACTCAATGAATGGAAGACTGAGTTATGTTTTTTTCCCAAAATTGGAGACATTAATACTTCAAGATCTCAATATATTGGAGACGATATGTGATGGCTCATTTATGAATCATTCATTTGCAAGACTTAGATCCGTCAAAGTCAAATGTTGTGACCAGTTGAAGTATATCTTCTCGGTGCCGATGGTCAAAGCTCTTTATCAACTTACTGAGATTGAAGTATTGGAATGCCATTCTTTAAAGAAGATTGTGTTTGTAGAAAACTCTATGGCTATTGATGAGAATATTGAGTTTGGTTCATTGCAATCCTTAACTTTAGGATATTTGCCAGCCATTGATGATTTCTACTCTGGTTTGCTGGAGTCTTCAACAACAACCATGCAGAATTTGTCGTTGGACAACAATGTTCCATCATCTTTTATTGATTCAAAGGTGAAGTTTTTCAATTTGGAGACTCTAAAGTTAAGTTCAATCAATCTAGAAAATATTTGGCAGGATGATTATGTTTCTGTAGCAAATTCTTTTCACAAGTTGGCTAACCTAAGTGTTGAGGGATGTAACTGCTTGAAGTATTTATTCTCATCCTCTATAATTGGTAGTTTTCCAAACCTTAAGCAGCTTGAAATAAGAGAGTGTGAGATAATGGAGCAGATAATTAGCATAGAGGGGAGAAACGGCGCTGCAACATGTGAGGTAGGGCTGCCAAAATTGGAGACTCTTGTGATAAGCAACATGAAAAGGTTAAAGAAAGTATGGCACTCTCAATTTGATGGGTTGAAGACTACGGAGGTAAATAACTGTGAGAAACTCAAAAATATTTTCCCATATGATATGCAAGGAATGTTTGGAAGCCTAGAGACATTGAAGGTAAGCAATTGTGGTTCAGTAGAAGAGATATTCCAATTAACTTCCAATAAAATCCATATTGAAGAAGAAGCAACGACACAAGTATCACAATTGAAGAAACTCCATCTACTTGACTTGCCAAAGCTGAAACAAATTTGGAGTAAGGATCCCCAAGGAATTGTTCACTTTCATTGTCTGGAAGATGTGCTTGTTAAATACTGTCAGAATATAGAATATCTCTTCCCATTTTCAATAGCAGTGAAACTTCCACAACTTGAAAAAATTATGGTGAGCAACTGTGGAATGCGTGAAATTGTGGCAAACGAAGTGGGAGCCATGGAGGAAAAAGTCATATTTCACTTTGATCGATTACACTCATTGGTGATTTGGAACATGTCTAAACTTGATAGATTCTATAATCGAAATCATAGTTTAACATGGCCCTCGTTGGAGGAACTATGGGTGGTCAACTGTGAAAAATTGAAGTTATAG 3696 0.3718 MEIVKTIAEKVAEPIVDYIVAPIGRQASYLIFYKDNFKNLKEQYTDLKRVKGTISHDVEVQRKNGRQIYDSVQNWLSRVDEIIEEAEQLSNDPQHRNVACCKGPFPNFKSRHQLSRKAKKMVGNVAEVMQQKDYIESLALLPDLEGVGSTFATSSEKLESRKKMKEDIMLALTDPHISRVGVYGLGGMGKSTLVKEVAKQVKNDKLFDKVVMANISHVADLERVQREIADFLGLRFEETTIIGRAARLRQSIKSERSILVILDDIWDILELDKLGLPLNDHKGCKLLLISRRLDVLQNMETQKDFLIDVLNEEETWCLFEDMVGDVVKDVNLRGVAIQVAQKCAGLIVLIVTIARALKNEDDIDCWKDALNQLKIVDEGGMSEKVYSVLEYSYNHLDGEDVKALFLLCGSIGPQIPVEYLLKYGMGLGIFKHINTIKDVRLELHRLIGSLKASCLLLESSSNMEVEMHDIVHEVAVSIASRDQHVFKIGMGGELKKWPSEEFLQRCTQIILHLCHIPKLPERLECPNIQLFYLYNKNESLSVPYSFFAVMKNLKALGLTCMHFPLLPQSFHSLIDLQTLCLDQCGLGDMTNIGALRNLQILSLCSSSMTTLPSELGQLIHLRMLDLTNSGIEIFPSNIISKLTKLEELYLGNTSIKWEQEDSDEENKNASLSELSHLTNLIALEIQIKGAWVLPRDIMFDKLERYKIVIGDVWEWSDNYGAPKMLKLKLSTIIHLEHGIKELIKGVEDLYLDEVHGISNVLYDLNGEGFPLLKHLHIQNNGKIQHIINSMNGRLSYVFFPKLETLILQDLNILETICDGSFMNHSFARLRSVKVKCCDQLKYIFSVPMVKALYQLTEIEVLECHSLKKIVFVENSMAIDENIEFGSLQSLTLGYLPAIDDFYSGLLESSTTTMQNLSLDNNVPSSFIDSKVKFFNLETLKLSSINLENIWQDDYVSVANSFHKLANLSVEGCNCLKYLFSSSIIGSFPNLKQLEIRECEIMEQIISIEGRNGAATCEVGLPKLETLVISNMKRLKKVWHSQFDGLKTTEVNNCEKLKNIFPYDMQGMFGSLETLKVSNCGSVEEIFQLTSNKIHIEEEATTQVSQLKKLHLLDLPKLKQIWSKDPQGIVHFHCLEDVLVKYCQNIEYLFPFSIAVKLPQLEKIMVSNCGMREIVANEVGAMEEKVIFHFDRLHSLVIWNMSKLDRFYNRNHSLTWPSLEELWVVNCEKLKL 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00088 1231 Gene3D Ribonuclease Inhibitor 470 707 IPR032675 -
Accr16g00088 1231 SMART AAA_5 176 313 IPR003593 GO:0016887
Accr16g00088 1231 Gene3D Ribonuclease Inhibitor 1089 1231 IPR032675 -
Accr16g00088 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 408 IPR027417 -
Accr16g00088 1231 SUPERFAMILY L domain-like 1019 1206 - -
Accr16g00088 1231 Coils Coil 72 92 - -
Accr16g00088 1231 Gene3D - 147 308 IPR027417 -
Accr16g00088 1231 PRINTS Disease resistance protein signature 1104 1120 - -
Accr16g00088 1231 PRINTS Disease resistance protein signature 179 194 - -
Accr16g00088 1231 PRINTS Disease resistance protein signature 252 266 - -
Accr16g00088 1231 Gene3D - 309 397 IPR042197 -
Accr16g00088 1231 SUPERFAMILY L domain-like 745 1084 - -
Accr16g00088 1231 SUPERFAMILY L domain-like 467 871 - -
Accr16g00088 1231 Gene3D Ribonuclease Inhibitor 716 1088 IPR032675 -
Accr16g00088 1231 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1071 1230 - -
Accr16g00088 1231 Coils Coil 30 50 - -
Accr16g00088 1231 Pfam NB-ARC domain 162 394 IPR002182 GO:0043531
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00088 180 447 WRKY Transcription Factor Family AT5G45050 24.306 9.97e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00088 - - aip:107625541 1118.99