Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00080 ATGACTGATGCAAATGCTGCTTCCTTCGAGGCGTTTCTTCGAGAATGGATGGTGCGACAGAAGGATTTGCTCGATGAACTGGTATCTACTCAGCGACGACGCGACGAATTGCATGACGATGATCTCAGAGAGTTGATTTCTAGGGTGCTTTCCCACTACGAGCAATATTACCAAGAGAAATCCAGAATCGCCAACCGCGACATCCTCCTCGCTTTCTCTCCCTCGTGGTTCAGCTCTCTGGAACGATCGTTTCTCTGGATAGCAGGATTCAAGCCGGGGATCGTGATTCAGCTTGCGAATCAGGTTTTGGATGATCTGTCGGAAGAACAGAGGAAGAGAGTGAGTGAACTCAACCAGGAGACGAAATTGGAAGAGCGAGCGCTTAACGATGAGTTCGCGAAGATTCAAGAGAGCGTCGGAGCATCGCCGCTGGTGGAGGTGGTGAGAAACCATGGGAGGTCGTGTTTGAGGGAGTCATATCGAACAGAGGAGTGTGGTGAAGTACCAGAGACGCTGAAAATTGCGTTGGAGAATTTAGTGGTTAATGCAGACACGTTGAGGATGAACACGGCGCTGAAGATGGTGAAGATATTGAAGCCAAATCAGGCAGTGAATGTGCTGGTGGCTGTGGCTGAGCTTCACATCAAGATCAGAACGTGGGGTCTGGAAAAAGATGCTCAGGGTGGTGCAGGTGGGTAG 699 0.5021 MTDANAASFEAFLREWMVRQKDLLDELVSTQRRRDELHDDDLRELISRVLSHYEQYYQEKSRIANRDILLAFSPSWFSSLERSFLWIAGFKPGIVIQLANQVLDDLSEEQRKRVSELNQETKLEERALNDEFAKIQESVGASPLVEVVRNHGRSCLRESYRTEECGEVPETLKIALENLVVNADTLRMNTALKMVKILKPNQAVNVLVAVAELHIKIRTWGLEKDAQGGAGG 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00080 232 ProSiteProfiles DOG1 domain profile. 6 227 IPR025422 GO:0006351|GO:0043565
Accr16g00080 232 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 229 - -
Accr16g00080 232 Coils Coil 100 127 - -
Accr16g00080 232 Pfam Seed dormancy control 24 98 IPR025422 GO:0006351|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00080 7 218 Calmodulin-binding Proteins AT1G77920 30.189 3.55e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00080 - - gmx:100780874 293.508