Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00070 ATGGCTTCCAATAATAATCTCTCTTCATCTTCTACTGATGCGGTATTAATTGGTGATGCCTCTGCAAAAGAACGCCTTCGTTGGACTCAGCAACTTCATGATCTCTTCGTTAAAGCTGTCAACAGACTTGGTGGCCCTGATCGAGCAACACCAAAGAGCATAGTGAAGGAGATGACGAGTATGGGGGTATCTGGAATCACCATTTATCACGTCAAAAGCCACTTGCAGAAATACAGGATCAACAAGTTAATTCCCGAGTCTGCTACTGGAAGCAAGCTTGAGAGAAGAAGCATATCGGACATACTGCGTAATTTCAGCACTTTAACCCCGCTGCAGCTCAAGGAGGCTCTACACTTGCAAATGGAAGTACAAAAACGCTTGAGCGACCAGCTAGAGGTTCAAAGGAGCTTGAAGTTAAAAATGGAAGCTCAAGGGAAATACTTGGAGAGACTGGGCCAAACTTATCAAAACTCAACCATCTCCACAAAACCTGATGGCAATAACAAGCTTCATGTTAATAATAATGCTGCACCTACGACGACTTCAATGTCTTGTCTTTCTGAGGAATCCGATGATATTGTTCAACCTACTCATTATGGTTCCAAACGCCGTAGGTCCAACGCTGTCACTCACAAAAAGCAAAGAATCGTCGTCCAAGATGATGCTATTAGGGTTAATAATTTCCCGACAAGTTTGGATCAGCTTTCTTCTTCATCGTCGTCGTCATCATCACCTACTCCGGAATTCTACAACCAAAACTGGGACCTACTTCCTTGGAATCAGCTCGCAGCTTCATTTCCATGTGAATCATCCTTGGTTCCAAGCTACTTGTTGTGA 837 0.4361 MASNNNLSSSSTDAVLIGDASAKERLRWTQQLHDLFVKAVNRLGGPDRATPKSIVKEMTSMGVSGITIYHVKSHLQKYRINKLIPESATGSKLERRSISDILRNFSTLTPLQLKEALHLQMEVQKRLSDQLEVQRSLKLKMEAQGKYLERLGQTYQNSTISTKPDGNNKLHVNNNAAPTTTSMSCLSEESDDIVQPTHYGSKRRRSNAVTHKKQRIVVQDDAIRVNNFPTSLDQLSSSSSSSSSPTPEFYNQNWDLLPWNQLAASFPCESSLVPSYLL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00070 278 NCBIfam myb-like DNA-binding domain, SHAQKYF class 23 81 IPR006447 GO:0003677
Accr16g00070 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 245 IPR044848 GO:0003700
Accr16g00070 278 Pfam MYB-CC type transfactor, LHEQLE motif 112 151 IPR025756 -
Accr16g00070 278 SUPERFAMILY Homeodomain-like 22 80 IPR009057 -
Accr16g00070 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 83 IPR017930 -
Accr16g00070 278 Gene3D - 22 83 - -
Accr16g00070 278 FunFam Two-component response regulator 19 83 - -
Accr16g00070 278 Pfam Myb-like DNA-binding domain 26 79 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00070 19 161 G2-like Transcription Factor Family AT4G28610 48.993 4.43e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr16g00070 Myb_DNA-binding 2.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00070 - - aip:107639556 231.106