Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr16g00066 | ATGGCTTCTAGTCCTCGCACAGTGGGGGATATCTTCAAGGATTATAGTGCTCGAAAAGATGGAATTCTTCGTGCTTTAACTGATGATGTTCATGACTTTTATCGGCTCTGTGATCCAGGTAAGAAGAGCTTGTCCCTTTATGGATATGTGGACAAAACCTGGAAAGTAACTGTGCCAACAGAGGGACTCCTACATGATATTCCGGAGCCAGCTGTTGGAATCAATCATTCTAAAGAACTCATGCCACCCAATGAATGGCTTTCTGTGGTTGCTGACTTGAGTGATTCATGGTTGCTTTCGGTAGCTTTTTATCGTGCCCGTCTTAACCCCGATGAAAGGGAACAGTTATTCAACTTGATCAACACTGATCCCACTGTTTTTGAAGTTGTGACTAAGAAGAACCCGTTAAAGGACAAGGCCACTGTGGAAAGTAGTAGCAAGCCTCGGGCCGGCGCCAAGAGAACAAGCGACAGGCAAGTGAAAAGCAACCCAAAGGTTTCTGATGAAGGTTACAAGGTGGAAGAAGACGATCAAAGCGGAAAACCTTGCGGTAGCTGTGGTGGAAATAAGGATTCAGGTGAAGCTTGGATTGAATGCGATATGTGCATGGAATGGTTCCACGAGAAATGTGTGCGGATTATTACTTCAAAGTTTGGGATCCTAAAGCAATACAAATGCCCATTATTTAATGTGACGGGAGGTAGGCCTTAG | 711 | 0.4473 | MASSPRTVGDIFKDYSARKDGILRALTDDVHDFYRLCDPGKKSLSLYGYVDKTWKVTVPTEGLLHDIPEPAVGINHSKELMPPNEWLSVVADLSDSWLLSVAFYRARLNPDEREQLFNLINTDPTVFEVVTKKNPLKDKATVESSSKPRAGAKRTSDRQVKSNPKVSDEGYKVEEDDQSGKPCGSCGGNKDSGEAWIECDMCMEWFHEKCVRIITSKFGILKQYKCPLFNVTGGRP | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr16g00066 | 236 | SUPERFAMILY | FYVE/PHD zinc finger | 174 | 227 | IPR011011 | - | |
Accr16g00066 | 236 | MobiDBLite | consensus disorder prediction | 138 | 179 | - | - | |
Accr16g00066 | 236 | Pfam | Alfin | 7 | 131 | IPR021998 | GO:0006355|GO:0042393 | |
Accr16g00066 | 236 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 173 | 230 | IPR013083 | - | |
Accr16g00066 | 236 | SMART | PHD_3 | 182 | 230 | IPR001965 | - | |
Accr16g00066 | 236 | MobiDBLite | consensus disorder prediction | 138 | 186 | - | - | |
Accr16g00066 | 236 | PANTHER | CPG BINDING PROTEIN | 4 | 230 | IPR045104 | GO:0006355|GO:0042393 | |
Accr16g00066 | 236 | Pfam | PHD-finger | 183 | 227 | IPR019787 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr16g00066 | 2 | 235 | Alfin-like Transcription Factor Family | AT5G05610 | 50.000 | 1.93e-67 | 206 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Accr16g00066 | Alfin | 6.2e-47 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr16g00066 | K26274 | - | qsa:O6P43_026231 | 288.115 |