Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00062 ATGTTCGTTTTAGATGAGAAGAATTTGTGCCTTTATGGACATCCAGATGAAAGCTGGGAAGTAACTCTGCCACCAGTGTACCTTCCACATGATATTCCTGAGCCAGCTCTTGGAATCAATTTTGCTAGAAAAGGCATGCAACCCAAGGACTGGCTTTCTCTGGTTGCTGCCCACAGCGATTCATGGTTGCTTTCTGTGGCCTTTTATCTTGGAGCCCTTCTTAACCGCGATGAAAGGGAACGGTTATTCAAGTTGATCAATGCTCATCCCACTGTTTTTGAAGTTGTGATTGAGAAGAACCCCGTAAAGGACAAGGCCACTATGGACAGTAGTAGCAAGCCTCGGGGCGGCACCAAGAGAACAAGCGACGGGCATGTGAAAAGCAACCCAAACTTATGCGATGAAGTTTACAAGGTGCAAGAAGACGATCCTAGTGAAAACACTTGCGGTATCTGTGGTGGAGATAATGATTCAGATGACGCTTGGATTCGCTGCGATATCTGCAAGAAATGGTTCCACGGGAATGTGTGA 531 0.4633 MFVLDEKNLCLYGHPDESWEVTLPPVYLPHDIPEPALGINFARKGMQPKDWLSLVAAHSDSWLLSVAFYLGALLNRDERERLFKLINAHPTVFEVVIEKNPVKDKATMDSSSKPRGGTKRTSDGHVKSNPNLCDEVYKVQEDDPSENTCGICGGDNDSDDAWIRCDICKKWFHGNV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00062 176 SUPERFAMILY FYVE/PHD zinc finger 140 174 IPR011011 -
Accr16g00062 176 MobiDBLite consensus disorder prediction 104 122 - -
Accr16g00062 176 PANTHER CPG BINDING PROTEIN 5 175 IPR045104 GO:0006355|GO:0042393
Accr16g00062 176 MobiDBLite consensus disorder prediction 104 129 - -
Accr16g00062 176 Pfam Alfin 6 97 IPR021998 GO:0006355|GO:0042393
Accr16g00062 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 176 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00062 7 174 Alfin-like Transcription Factor Family AT5G05610 57.988 6.00e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00062 K26274 - cave:132191911 258.455