Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00060 ATGGCTGTCGACTACTACAAGATCCTTCAGGTAGACCGAAGCGCCAACGGCGATGATCTCAAGGAGGCCTTTCGGAAGCTTTTCTTGAAGTGTCACCCTGATAAGAACCCTGACAACAAGAAAGCGGCTGAAGCTAAATTCAAGCAAATATCTGAGGCTTATGATGTTTTGAGTGACCCACAAAAGCGAGCCGTGTATGATCATCAATCCGGTTCTGACGATGGCACCGGACAATGCTCCATCTTTAGTTGCTTTTATCAGGACCAGGTGTCCCTTTTGTTGCTGTGTCCGTACACCATTTCTTTTCGAGACAAGTTTCTTATTGGTAGTTCAAAGGTTGCAAATATGCCCTTTAGGTTTTGTTTCGGAGTTTAG 375 0.4507 MAVDYYKILQVDRSANGDDLKEAFRKLFLKCHPDKNPDNKKAAEAKFKQISEAYDVLSDPQKRAVYDHQSGSDDGTGQCSIFSCFYQDQVSLLLLCPYTISFRDKFLIGSSKVANMPFRFCFGV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00060 124 PANTHER DNAJ HOMOLOG SUBFAMILY B 3 72 - -
Accr16g00060 124 Pfam DnaJ domain 4 67 IPR001623 -
Accr16g00060 124 PRINTS DnaJ domain signature 24 39 IPR001623 -
Accr16g00060 124 PRINTS DnaJ domain signature 42 62 IPR001623 -
Accr16g00060 124 PRINTS DnaJ domain signature 62 81 IPR001623 -
Accr16g00060 124 PRINTS DnaJ domain signature 6 24 IPR001623 -
Accr16g00060 124 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Accr16g00060 124 CDD DnaJ 4 59 IPR001623 -
Accr16g00060 124 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Accr16g00060 124 SMART dnaj_3 3 62 IPR001623 -
Accr16g00060 124 Gene3D DnaJ domain 1 80 IPR036869 -
Accr16g00060 124 SUPERFAMILY Chaperone J-domain 3 85 IPR036869 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00060 5 70 C2H2 Transcription Factor Family AT1G74250 36.620 1.22e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00060 K09510 - vvi:100253930 119.783