Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00054 ATGGCGTCGAATCATCAAGAAGCATTGCTGATGGCCGAGAACGGAAATATCAAGGAACTGAACGGAAAGGAGATTACGAGGCGACGATCGGCTCGGAAAATGTCGTCTACCTCTTTGCGGAAGAAATCTGACATGAGGCTTATCTCCAAAGTTCGATGCGCTTTGCTGAGAAATTTTTTGGCTAATCTGCAAGAGGTCATTCTTGGAACTAAGCTTTCAGTCCTTTTCCCTGCGATTCCTCTCGCCATTGCTGCTGATTGCTATGGATTCGGACGACCGTGGATTTTTGCGTTGAGCTTACTAGGACTGACACCACTTGCTGAAAGAATCAGCTTCGTGACAGAGCAAATTGCTTATTACACTGGTCCCACTGTGGGAGGGCTTCTGAATGCGACATGTGGAAATGCAACAGAGCTCATAATAGCAATATTTGCTCTCAACAGCAACAAAATAGCTGTGGTCAAGTATTCTCTCTTAGGTTCCATCCTTTCAAACCTTCTCTTAGTCCTTGGAACCTCTCTTTTCTGTGGTGGCATAGCAAACATTTCACTTCCACAGCCACAAAAATATGACAGAAGGCAAGCAGATGTGAACTCACTCATGCTTCTTCTTGCATTATTGTGCCACATGCTTCCAATGCTATTCAGATATGCTACTTCCTCAACTGGTCTCGTTGCAGACCCCTCTCTCGAATTATCAAGAGCTTCAAGTATTGTCATGTTGATTGCCTATTTTGCTTACCTTGTCTTCCAACTCTGGACACATCGCCAATTATTCGAAGCCCCGGATGAAGATGTTAATGACGACAGCGTTTCAGAAGAAGCAGTGATAGGACTCTGGAGTGGGTTTTCATGGATGGCAGGGATGACAGTGTTCATAGCATTGTTGTCTGAGTATGTGGTGGAGACAATAGAGGATGCATCAGACTCATGGGGTCTGTCTGTCAGCTTCCTCAGCATAATTTTACTGCCAATAGTAGGAAATGCAGCTGAACACGCAGGAGCTATCATTTTTGCCTTTAAGAACAACCTTGACATCTCTTTGGGTGTTGCTTTGGGTTCTGCAACTCAAATTAGCTTGTTTGTGGTTCCCCTCTGTGTGATTATTTCTTGGATAATGGGCAACAAAATGGATCTTAACTTCAACCCCGTTGAAACTGGTTCACTTGCTTTGGCCATTATTGCCACTGCCTTCACTTTACAGGATGGAACATCTCATTACATGAAAGGTTTTATTCTCCTGCTCTGCTACGTTGTTATTGGGGCATGCTTTTTTGTACAGAGAACACCATTCAACCAAGCTCATCTCCACGATATGATGCCTAACCCAGCACCCAACGCAATTTTCAAAGCTTAA 1356 0.441 MASNHQEALLMAENGNIKELNGKEITRRRSARKMSSTSLRKKSDMRLISKVRCALLRNFLANLQEVILGTKLSVLFPAIPLAIAADCYGFGRPWIFALSLLGLTPLAERISFVTEQIAYYTGPTVGGLLNATCGNATELIIAIFALNSNKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANISLPQPQKYDRRQADVNSLMLLLALLCHMLPMLFRYATSSTGLVADPSLELSRASSIVMLIAYFAYLVFQLWTHRQLFEAPDEDVNDDSVSEEAVIGLWSGFSWMAGMTVFIALLSEYVVETIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNNLDISLGVALGSATQISLFVVPLCVIISWIMGNKMDLNFNPVETGSLALAIIATAFTLQDGTSHYMKGFILLLCYVVIGACFFVQRTPFNQAHLHDMMPNPAPNAIFKA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00054 451 NCBIfam calcium/proton exchanger 58 425 - -
Accr16g00054 451 NCBIfam calcium/proton exchanger 77 425 IPR004798 GO:0006816|GO:0015369
Accr16g00054 451 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 26 430 IPR004713 GO:0006812|GO:0008324|GO:0016020
Accr16g00054 451 Pfam Sodium/calcium exchanger protein 283 420 IPR004837 GO:0016020|GO:0055085
Accr16g00054 451 Pfam Sodium/calcium exchanger protein 94 253 IPR004837 GO:0016020|GO:0055085
Accr16g00054 451 Gene3D - 270 426 IPR044880 -
Accr16g00054 451 FunFam Vacuolar cation/proton exchanger 270 426 - -
Accr16g00054 451 FunFam Vacuolar cation/proton exchanger 123 269 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00054 1 430 Antiporters AT2G38170 67.808 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00054 K07300 - rcu:8267509 632.869