Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00043 ATGGGATTAGAGCAGCTGAGTCCGAACGATACAAAGGGCAAGATCATTACTTGCAGAGCGGCGGTGGCTCATGGAGCCGGAGAGGCGTTGGTGATAGAAAAAGTGAAAGTTCATCCGCCACAGAAGAAGGAGGTCCGAATCAAGATCCTCTTTACTTCTATCTGTCATACTGATCTCTCTGCCTGGCTCGGCGAGAATGAAGCTCAAAGGGCTTATCCTAGGATTCTTGGCCATGAAGCCTGCGGGATAGTGGAGAGTGTAGGGGAAGGAGTCAAGGATGTGAACGAAGGGGATTATGTGGTGCCCTTATTCAATGGCGAGTGTGGGCATTGCAAGTTGTGCAAGTGTCCCCACACCAACATGTGCCAACACTTTGGAGTCAACCCCATGAAGAAGGACATGGTGGCCGACGGCGCCACCAGGTTCACCACTGTCGACGGTGGCAAACCCATCTACCATTTCCTCAACACCTCCACCTTCACCGAGTACACCGTCGTTGACTCCGCTTGCGTCGTCAAACTCAGCGGCCTCATCGATCAACATAGCCTCAAAAAGCTCACCCTACTCAGCTGTGGTGTTTCCACGGGGGTAGGAGCAGCATGGAACACAGCCAATGTGCAATCTGATGCTACGGTTGCCGTCTTCGGTTTGGGAGCCGTCGGCCTCGCTGTGGCTGAAGGTGCGAGAGCAAGAGGGGCATCAAAAATAATAGGCATTGACATCAACCCCGACAAATTCATCAAAGCCCGGGAGATGGGAGTGACGGATTTTATAAATCCAAAGGATGAAGATAAGCCTGTCTATGAGATAATAAGAGAAATGACTGGAGGAGGAGTAGACTTTAGCTTTGAATGTGTAGGAAACGCTGATGTCCTCCGAAATGCCTTCTCGTCTGTTCATGAGGGATGGGGATTGACGGTAATATTGGGAATACATACGACACCACAAATGCTTCCAATTCATCCAATGGAGCTGTTTGATGGTCGCAGAGTTATTGCTTCTGTGTTTGGAGGCTTCAAAGGCAGGTCCCACCTCCCTCTCTTTGCCAAACAATGCCTGCAAGGAATGGTGAAGCTGGACGGGTTCATTACTCACGAACTACCCTTTAAAGAGATCAACAAAGCCTTTGATCTTTTGGTCTCCGGCAAGTCACTGAGATGTCTCCTACACCTGTGA 1176 0.5009 MGLEQLSPNDTKGKIITCRAAVAHGAGEALVIEKVKVHPPQKKEVRIKILFTSICHTDLSAWLGENEAQRAYPRILGHEACGIVESVGEGVKDVNEGDYVVPLFNGECGHCKLCKCPHTNMCQHFGVNPMKKDMVADGATRFTTVDGGKPIYHFLNTSTFTEYTVVDSACVVKLSGLIDQHSLKKLTLLSCGVSTGVGAAWNTANVQSDATVAVFGLGAVGLAVAEGARARGASKIIGIDINPDKFIKAREMGVTDFINPKDEDKPVYEIIREMTGGGVDFSFECVGNADVLRNAFSSVHEGWGLTVILGIHTTPQMLPIHPMELFDGRRVIASVFGGFKGRSHLPLFAKQCLQGMVKLDGFITHELPFKEINKAFDLLVSGKSLRCLLHL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00043 391 PANTHER ALCOHOL DEHYDROGENASE 13 388 - -
Accr16g00043 391 Pfam Zinc-binding dehydrogenase 219 338 IPR013149 -
Accr16g00043 391 FunFam Alcohol dehydrogenase 6 21 211 - -
Accr16g00043 391 SUPERFAMILY GroES-like 11 207 IPR011032 -
Accr16g00043 391 SUPERFAMILY GroES-like 340 390 IPR011032 -
Accr16g00043 391 FunFam S-(hydroxymethyl)glutathione dehydrogenase 196 334 - -
Accr16g00043 391 Pfam Alcohol dehydrogenase GroES-like domain 43 147 IPR013154 -
Accr16g00043 391 Gene3D - 21 386 - -
Accr16g00043 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Accr16g00043 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 183 355 IPR036291 -
Accr16g00043 391 Gene3D - 196 334 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00043 42 122 Monolignol Biosynthesis Gene Families AT4G37980 44.578 1.20e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00043 K00001 - gmx:100787307 587.8