Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr16g00041 ATGCGCAAGTCTTTCAAGGATTCCCTCAAAGCTCTCGAAGCTGATATCCAGTTCGCCAATACCCTAGCTTCTGATTACCCAAGAGATTATGATGGTGCCTGCATCCAAATGAGATTGTCCTACAGTCCAGCAGCTCAATTTTTTCTTTTTCTGGTTCAGTGGACTGATTGTAACCTTGCTGGAGCCTTGGGATTGCTTAGAATTCTCATATACAAGGCATACGAGGATGGTAAGACAACAATGTCCATTTATGAAAGAAAAGCCAGCCTGAAGGAGTTCTATTGCGTGATCTTTCCCTCTTTATTGCAACTCCACAGAGGAATTACTGATGTAGAAGACAGAAAACAAAAAGAAATATGTGCTACTAAGTATAAGTCGAATGCTGTAGTCAGCAAAGGAAAGCATTCTGAAATTGACACAGAGAGAGAGGAAGAATGTGGTATTTGCTTGGAGGTGGGCAGCAAGATTGTATTGCCCAGTTGCAGTCACTCAATGTGCTTGAAATGCTTTCGAGATTGGCATGCACGATCACAGTCTTGCCCTTTCTGCCGGGACTGTCTGAAAAGAGTGAACTCTAGTGACCTTTGGGTGTACATGAACAACAATGAGATAGATGACATGGCCTCAATCACAAGGGAGAATTTAAAGAGGTTATTCATGTACATTGAAAAGTTGCCTGTTCTTGTTCCTGATCCAATATTTATGTCTCATCCCATCCGCTGGTAA 726 0.4215 MRKSFKDSLKALEADIQFANTLASDYPRDYDGACIQMRLSYSPAAQFFLFLVQWTDCNLAGALGLLRILIYKAYEDGKTTMSIYERKASLKEFYCVIFPSLLQLHRGITDVEDRKQKEICATKYKSNAVVSKGKHSEIDTEREEECGICLEVGSKIVLPSCSHSMCLKCFRDWHARSQSCPFCRDCLKRVNSSDLWVYMNNNEIDDMASITRENLKRLFMYIEKLPVLVPDPIFMSHPIRW 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr16g00041 241 PANTHER RING FINGER PROTEIN 41, 151 3 235 - -
Accr16g00041 241 SMART ring_2 146 183 IPR001841 -
Accr16g00041 241 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
Accr16g00041 241 Pfam Ring finger domain 145 184 IPR001841 -
Accr16g00041 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 195 IPR013083 -
Accr16g00041 241 FunFam RING/U-box superfamily protein 128 193 - -
Accr16g00041 241 SUPERFAMILY RING/U-box 136 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr16g00041 90 188 C3H Transcription Factor Family AT5G01960 29.808 1.95e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr16g00041 K25840 - pop:7466068 404.445