Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00406 ATGGGTATGACTGCAGACACCCAGTTTCATGTTTTGGCTGTTGATGACAGTCTCATTGACAGAATGTTGATTGAGCGGCTCCTCAAAACCTCATCCTTCCAAGTTACAGCAGTGGATTCTGGAAGCAAGGCTTTGAAGTTTCTTGGTTTAAATGAAGATGAACAGAGAAAAGCAGATAGAGTCTCTGTTGATTCTAATAGCCATCAGGATTTAGAGGTGAACCTGATCATAACAGATTACTGTATGCCAGGAATGACAGGCTATGATCTACTGAGAAAAATCAAGGAATCTGAATCTCTCAAAAACATACCAGTGGTAATTATGTCCTCAGAGAATGTCCCATCAAGGATCAACAGATGCTTAGAAGAAGGAGCTCAAGAATTCTTCCTGAAACCAGTTCAACAGTCGGATGTAAACAAGCTCAAGCCACATTTGATGAAATCAAAAGTTGAGGAAGAGGAAGAGGAAGACCAATTCAACAATAACAAAAGGAAGGACATGGAAGAAGAAACCATTCACCAGATAGAACCAGAGCAAAAATATAGCAGTTAG 552 0.4004 MGMTADTQFHVLAVDDSLIDRMLIERLLKTSSFQVTAVDSGSKALKFLGLNEDEQRKADRVSVDSNSHQDLEVNLIITDYCMPGMTGYDLLRKIKESESLKNIPVVIMSSENVPSRINRCLEEGAQEFFLKPVQQSDVNKLKPHLMKSKVEEEEEEDQFNNNKRKDMEEETIHQIEPEQKYSS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00406 183 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Accr15g00406 183 CDD REC_typeA_ARR 11 141 - -
Accr15g00406 183 SMART REC_2 9 145 IPR001789 GO:0000160
Accr15g00406 183 MobiDBLite consensus disorder prediction 143 176 - -
Accr15g00406 183 MobiDBLite consensus disorder prediction 143 183 - -
Accr15g00406 183 SUPERFAMILY CheY-like 9 145 IPR011006 -
Accr15g00406 183 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 162 IPR045279 GO:0009736
Accr15g00406 183 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Accr15g00406 183 Coils Coil 150 170 - -
Accr15g00406 183 Gene3D - 10 181 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00406 1 157 Response Regulator Gene Family AT3G57040 65.868 9.32e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr15g00406 Response_reg 9.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00406 K14492 - qsa:O6P43_001477 270.781