Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00398 ATGAGATTGGAGAAATGCTGGTTTTGCTCTTCAACCGTATACCCTGGGCATGGAATCCAGTTCGTTCGTAATGATGCAAAGATTTTTCGATTTTGTAGATCTAAATGCCACAAGAACTTTAAAATGAAGAGGAATCCTCGTAAAGTAAAATGGACCAAGGCATATCGTCGATTGCATGGAAAGGATATGACACAGGATTCAACCTTCGAGTTTGAGAGAAAGCGAAACAGACCTGAAAGATATGATCGGAATCTTGCGGAAGATGTCCTCAAGGCTATTCCAAAGATTGATAAGATCAGAGTTAGAAGGGAGGAGAAACACCACAAGAATAGAATGAAAGGCAATAAGGCCAAGCTGCTCAAGGAGGCTGCAAGGGAGTTGGAGCAGGGCATCAATTTGGTCAAACCTCCATCTGTGCTTCAAAAGGATCCATCTCTCACACTACCACAGATCAAAGTTCTGGTTCCCCAACAGCAAACAGAGGAAAATCGTCCCATGGAAGAGTGA 507 0.43 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFERKRNRPERYDRNLAEDVLKAIPKIDKIRVRREEKHHKNRMKGNKAKLLKEAARELEQGINLVKPPSVLQKDPSLTLPQIKVLVPQQQTEENRPMEE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00398 168 Coils Coil 109 129 - -
Accr15g00398 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Accr15g00398 168 SMART 4TRASH 6 44 IPR011017 -
Accr15g00398 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Accr15g00398 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 166 IPR000988 -
Accr15g00398 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Accr15g00398 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Accr15g00398 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Accr15g00398 168 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00398 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 66.071 3.67e-79 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00398 K02896 - gmx:100793564 317.775