Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00348 ATGGATTTGTTGGATTCGAAAGAGAAACATAAAACCGTGAAAGAAGAAGAAAACGACGACTTTGATTCGTCTGTTCTTTCAGCGTGTCGTCTTCGCAGTAGTCAGATCTTCTCTGCAGCTCTGAACGCTGCCATTGAACTCAACTTGTTCGACTTCATCGCTGAGGAAGGAGAAAGGCACGTGTCAGCTTCTGAAGTGGCCCGTCGGCTTCCAAGTTCATGTCAGCACAGAGACTTGTCTTCCAGAATCGATCGTCTCTTGAGGCTTCTCGCCAGTCACTCTCTTCTCGATTGTAGGGTTTGTGAGAAGAAGGAAGAAGAAAAAGATGGTTCCACTGAGAGACTTTATGCCCTTTCTTCCATAGGCAGGCAGTTTGTGAGTGGATCCTTGGGATTCGTACCAATCTTCTCTCATCCTGCACTCATGCAAGCTTGGATCAACTTTAAGGATGCAATAATAGATGAAGACAGCGACTTGTTCAAGAAAGTTCATGGAATGCCAATGTACCAATACGCAAAGACTGATCCAACATGGAATAAAACTTTCAACAAAGCAATGGCCAATTTTTGCAGTATGGAGATGAAAAGGATTCTGGAAATATACGAAGGATTTGAGGGAATATCAACAATTGTTGATGTTGGAGGTGGCACTGGTCAAAACCTTAAAATGATTGTCTCTAAGTATCCTTCAATTAAGGGTGTCAATTTTGATTTGCCCCAAGTCGTTCAAAATGCACATTCTATTCCAGGGATTGAACATGTTGGAGGAGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCATGATATTGAAGGCTGTATGTCACAATTGGTCAGATGAAAATTGCATAAAAGTGTTGAAGAAATGTCATGAATCATTACCAGAAAAAGGGAAGGTGATGGTGGTGGAGTTTATAATGCCTGAAGCAAATATGGCAACAGAAGAAGCCAAGTACGTGTCAACCTTGGACAACCTCATGTTCCTTCATGATGGAAGAGAAAGAACTGAGAAGGAGTTTGAGTCTCTTTGCAAAAATTCTGGATTTTCAAGCTTCAAAGTTGCTTGTCGTGCTTTTTCTGCTTTAGGAGTCATGGAATTTTGCAAATAA 1107 0.4128 MDLLDSKEKHKTVKEEENDDFDSSVLSACRLRSSQIFSAALNAAIELNLFDFIAEEGERHVSASEVARRLPSSCQHRDLSSRIDRLLRLLASHSLLDCRVCEKKEEEKDGSTERLYALSSIGRQFVSGSLGFVPIFSHPALMQAWINFKDAIIDEDSDLFKKVHGMPMYQYAKTDPTWNKTFNKAMANFCSMEMKRILEIYEGFEGISTIVDVGGGTGQNLKMIVSKYPSIKGVNFDLPQVVQNAHSIPGIEHVGGDMFESVPKGDAMILKAVCHNWSDENCIKVLKKCHESLPEKGKVMVVEFIMPEANMATEEAKYVSTLDNLMFLHDGRERTEKEFESLCKNSGFSSFKVACRAFSALGVMEFCK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00348 368 Pfam O-methyltransferase domain 145 349 IPR001077 GO:0008171
Accr15g00348 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 368 IPR016461 GO:0008168
Accr15g00348 368 SUPERFAMILY "Winged helix" DNA-binding domain 20 128 IPR036390 -
Accr15g00348 368 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Accr15g00348 368 FunFam Caffeic acid O-methyltransferase 124 368 - -
Accr15g00348 368 Gene3D - 4 124 IPR036388 -
Accr15g00348 368 FunFam Caffeic acid 3-O-methyltransferase 5 125 - -
Accr15g00348 368 Gene3D Vaccinia Virus protein VP39 129 368 IPR029063 -
Accr15g00348 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 358 IPR029063 -
Accr15g00348 368 CDD AdoMet_MTases 209 306 - -
Accr15g00348 368 PIRSF O-mtase 5 368 IPR016461 GO:0008168
Accr15g00348 368 PANTHER O-METHYLTRANSFERASE 31 351 IPR016461 GO:0008168
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00348 22 368 Monolignol Biosynthesis Gene Families AT5G54160 45.480 2.03e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00348 - - gmx:100784030 406.757