Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00343 ATGGCTTTGAATTCTAAAGAGACTCATCGTCTGAATGATGAAGAACAAGATTCGTACGGCCTTTCTGCCATGCTTCATGGTTGTAGCCAGGTCTACTGTGCAGTTCTTAAAGCTTCGCTTGAGCTCAACTTGTTTGAGATAATAGCTAAGGAAGGAGGAAGACACGTGTCAGCCTCTGAAGTAGCTTCAAAGCTTCCAAGTTCATCTCAACACAAAGATTTAGCTTCTAGGATCGATCGTCTCTTGAGGCTTCTTGCAAGTCACTCTCTTCTGAATTGTTCGGTTCGAGAGAAGGAAGATGGTGTATCTGAGAGACTCTATGCAATTTCTCCTGTTGGAACCTACTTTGTTGGTGGGGACAATAATGGTGGACTCATGACTCTTTTTTCATCATTCCTTTGTCACAAGGCACTTATGGATGCTTGGATGAATTTTAAGGTTGCCATTATAGAGGAAGACACTGACTTATTCAAGAAAGTTCACGGAATACCAATGTACCGATACGCAGAGAGAGATCCAACATGGAACAACATTTTTAACAAAGCAATGGCCAACGTTTGCGACATAGAGATGAGAAGAATTTTGGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATGTTGGAGGTGGTACTGGCCAAAACCTTAAAATGATTGTCTCTAAGTACCCTTCAATTAAGGGCATCAATTTTGATTTGCCCAATGTTATTCAAAATGCAACCCCTCATCCAGGGATCGAGCACGTTGGAGGGGACATGTTTGAAAGTGTTCCGAAGGGTGATGTTATTATGTTGAAGGCCGTATGCCACAATTGGTCAGATGAAAATAGCATAAAAGTGTTGAGGAAATGCCACGAAGCATTGCCAGAGAAGGGGAAGGTGATAGTGATTGAGTTGATAATGCCTGAAGTAATTGGATCAACAGAAGAAGCCAAGTTTGTAGCAAGCTTGGACAATCTCATGTTCCTTCATGATGGAAGAGAAAGAACTGAGAAAGAATTTGAATCCCTTTGCAAACGTTCAGGCTTTTCTGCTTTCAAACTCGCTTCTCGTGCTTTCTATGCTTTAGGAGTTATGGAATTCTACAAATAA 1098 0.4098 MALNSKETHRLNDEEQDSYGLSAMLHGCSQVYCAVLKASLELNLFEIIAKEGGRHVSASEVASKLPSSSQHKDLASRIDRLLRLLASHSLLNCSVREKEDGVSERLYAISPVGTYFVGGDNNGGLMTLFSSFLCHKALMDAWMNFKVAIIEEDTDLFKKVHGIPMYRYAERDPTWNNIFNKAMANVCDIEMRRILEIYKGFEGISTLVDVGGGTGQNLKMIVSKYPSIKGINFDLPNVIQNATPHPGIEHVGGDMFESVPKGDVIMLKAVCHNWSDENSIKVLRKCHEALPEKGKVIVIELIMPEVIGSTEEAKFVASLDNLMFLHDGRERTEKEFESLCKRSGFSAFKLASRAFYALGVMEFYK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00343 365 Gene3D - 31 194 IPR036388 -
Accr15g00343 365 FunFam Caffeic acid O-methyltransferase 120 365 - -
Accr15g00343 365 Pfam Dimerisation domain 35 86 IPR012967 GO:0046983
Accr15g00343 365 FunFam Caffeic acid 3-O-methyltransferase 2 116 - -
Accr15g00343 365 PANTHER O-METHYLTRANSFERASE 33 355 IPR016461 GO:0008168
Accr15g00343 365 Pfam O-methyltransferase domain 142 346 IPR001077 GO:0008171
Accr15g00343 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Accr15g00343 365 Gene3D Vaccinia Virus protein VP39 176 352 IPR029063 -
Accr15g00343 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 365 IPR016461 GO:0008168
Accr15g00343 365 SUPERFAMILY "Winged helix" DNA-binding domain 18 120 IPR036390 -
Accr15g00343 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 355 IPR029063 -
Accr15g00343 365 CDD AdoMet_MTases 206 299 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00343 17 355 Monolignol Biosynthesis Gene Families AT5G54160 48.266 9.34e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00343 - - pcin:129312384 434.106