Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00302 ATGAAGAGGTTGAGGTCTAGTGAGGATCTCCATTCGTACGGAGACAAGAATGGCTGCAAGGATTCGAATCTGAACCGATCCTCGTCTTCTTCACACCGAACCTTTTACTACAAACCTGATAATGTGCGGAAGGGATTGCTTTCCTCATCGTCTTCGGCGTCTCGGTATGACAGGGATCGAACGATGGATGAGGATCGGGAAGGTTCCCGCTTGGTTCGGAAACGATCAGACCATGATTTTGATAGTTTTGATCGCAGAAAGGGGTTTGATCGTTACAGGGATACTGGAGATAATAGAGGATACGGAGCTGGAGGGGATAGGGGTTTGATGCAGAGGTCGGAGAGTTTTTGTGGGTCTAGGAGGGATTTTCCGAAGGGCTTTCGGTCTGAGAGGGACCGGTCTCGGCGGGAAGGTAGTGTGTCTTCGTGGCGGAGATTTGGAGGTGGGTTAAAGGATTTTGATGATAGTGGCAGGGTTAGCAGGGTTGGACTGGAAGATAGAGTAGTGCGGTCTCCGAAGACTTTGAGGGATGTAAAATCACCGACATGGTCGAAAGATTCAGAGAGTGAGCATTCCAAGATGAGTGAGCCGTCTAAGATGAGGTCTTCTTCAAGAGGGTCAAGAGATGCAAAGTCGAAGTCAAAGTCTCCATCTTGGTCCAAGGATTCAGAGAGTGAACAATCAAAGAGTGAGCAATCTAAGAGTGTTGAGGTGAAGAAAACTGAGGAATTGCAGGTTGAGAGCCGTAGTAGTAGTGAAATGGAAGAAGGAGAACTGGAGCCAGAACCTATGCCTGAAACAGAACCAGAAAAGGCTTCTGATGCTGCACCTAAGAATGAAGACCAGACCTCTAATACTTTGGACACTGATGATAAGGAAATCCAGACTGAAAGCCAGCTCAATGATACAGATACTACCATGCATGAAATAATGGAAGAGTTAAATAAAGAAGAGGCAAAACCAGAAGAGGTTGCAAATTCAGCCGGAAAGATTGTGGAGAAAGATAAGAAGCTGCCAGATGTTCAGAATGATCCAACTGCTAAAGTGCATGATACCAAAAATGAAATTGAAACTTCTGTTCATAATGATAACAAGGCAGAAGAGAGTTCAAAAGTTGAAACCACATGTAAGGGGGAAACAAAGGAAGGTGCGGAGCATGAGAAGCCATTGCTGCATGAAGAGGAACATAAGCAGGACAAGGGTGTAGATCTTGAAACCAGGGCAGAGCTACACAAGGAAGTTTCAACAGAAAATGAAGTGCTTAAAACAGATGTGGAATCGACGATGGAGATTGTGACCAACAATGTGAAGGATAAAGGCAAAAGTGTCTCTGTTACCGCTAATGATGTTGTTCATCCTTCTGAAGATGGTTTGTGGAATGACAGAGGGCCCAGAGATCTCACAGCATGCTCTGGTGATGCCATGGAAGGTCCAAGCACAAGGGGCTTTGAGTTGTTTTCCAGATCTCCCGTTAGGAGAGCAGAGAAAACTGACCAATCAAGTCTCAGCAAACATAAAGATGGAAGTCTATCAATGGAGGAGCTTGATCTTTCTCTTAGCTTGCCTAATGTTTTGTTACCTATTGGTGCTCATGAGACTGCACCAGCCCCTGGATCCCCCAGTCAAGCTCGAAGTGTCCAGTCTTTAAGTACATTCCGTACCAACTCAGAAGGATTTACTGCGTCAATGTCTTTCTCAGGTTCTCAATCTTTTTATCACAATCCAAGCTGTTCTCTCACACAAAATTCAATCGATTATGAACAATCTGTTCATAGTCGCCCATTATTTCAGGGAATAGATCAAGTTTCTCATGGAGGCTGGCAAGGTATGTCTCAGACTGATCCCAAACAGAAAGAAATTCCTTACTGTCAAGGAACTTTGATTAATGGCAGTGGCAGCTTTTCTCAGTCTCAACCAACATGGGGCATTTCGGATGGTCAAGCTGTGAAAGGTCAGCCTTCTAGGGTTCTAGAAGGTAGCTCAAAAATGGCCAGCGGCCTTGACAGGCAATTGAGTTTTCATAAGCAGCTGTCGGGACAGTCAAGGCGCCATGGTGATGTTAGATCTCCTTCTCAGAGTGTTGGTTCTCATGACATTGGATCAAATTATAGTTTTGACAAGAAGAGAGAAATGAGAGACAGGAGTAATGGTAGTTTATACAGGACTGCAAGCCAGAAGGAACAAGAACAATTTCAGATGGGTGGAATTGAGTTTGTTGAGACAATCATTGCAAAAATAGTTTCTGAACCAGTGCCTGCTATGGCTAAAAAGTTTCATGAAATGAGTGGACAGACTTTATCATGTTTGAAAGAGAGCATTCGTGAGATTATGCTCAGTGCAGATAAGCGTGGGCAAATACTTGCTTTTCAGAAAGTTCTGCAGAACAGGTCTGATATAACCCTGGAGGTTTTGCTAAAGGCCCACCGAGTTCAATTGGAAATTTTGGTTGCTTTGAAAATGGGTTTAGTTAATTTTATTCAGTTAGACAACAGCATTTCGTCTACTCATTTAGCCGAGATTTTTCTGAACTTAAGGTGTAGGAATGATTTATGCCGGAGTCAGTTGCCTGTGGATGAGTGTGATTGCAAAGTTTGTGCACCGAAAAATGGCTTTTGCAGGGAATGTATGTGTCTTGTGTGTTCTAAGTTTGACAATGCATCAAATACTTGTAGTTGGGTTGGATGCGATGTTTGCCTTCATTGGTGCCACACAGAATGTGGATTACGTGAATCATATATTAGAAATGGACCCAGTGCTACTGGGGTACAAGGGGTACCTGAGATGCAATTTCATTGTATTGCTTGTGATCATCCTTCAGAGCTGTTTGGTTTTGTCAAGGAAGTGTTTCTAAGTTTTGCAAAAGATTGGTCCGTTGAAGCTCTTTGCAAGGAGCTTGAATATGTGAAGAGAATATTTTCTGCCAGCAAAGACATGAGAGGGAGACAGCTGCATGGGTTGGCTGATCAAATGCTGCTAAGGTTGGCAAATAAATCTAACCTTCAGGAGGTTTATAGCCAAATCATGTCTTTCCTAAATGATGGAGATTCTTCCAAATTAGCCTTGACACGGAACTTTTCTGGGAAGGAGCAAATTAAAGAAAAGAATGCAGTTGCTGAGCCCAGTCAGGAGGCTGCCTGGATGAAATCAATCTACTCCGAAAAGACGCCTCTGTTAGAACGGCCAGCAAACATCCTTTCGAGCTATGACCGTAATGACAAACAGGCTCCACCACCGCAAGAGTTGCTGATGAATGTCCAAAAGGACTATTGTTTTGATGAGTTGGAGAGCATAATAAAAATTAAACTGGCAGAGGCTAAAATGTTTCAAACACGGGCGGATGATGCCAGAAGAGATGCTGAAGGCTTGAAACGTATTGCCCTCGCAAAGAATGAGAAGATTGAAGAAGAGTATGCCAGCCGACTCTCAAAGTTGCGACTGGCAGAGACCGAGGAAATGCGTAGACAAAAAGTTGAAGAGCACCAGGCATTGGAAAGAGCGCATCTGGAGTACTTTAACATGAAAATGAGGATGGAAGCAGACATTAAGGATCTGCTATTGAAAATGGAAGCAACCAAAAGGAGTCTTGCCATGTGA 3594 0.4371 MKRLRSSEDLHSYGDKNGCKDSNLNRSSSSSHRTFYYKPDNVRKGLLSSSSSASRYDRDRTMDEDREGSRLVRKRSDHDFDSFDRRKGFDRYRDTGDNRGYGAGGDRGLMQRSESFCGSRRDFPKGFRSERDRSRREGSVSSWRRFGGGLKDFDDSGRVSRVGLEDRVVRSPKTLRDVKSPTWSKDSESEHSKMSEPSKMRSSSRGSRDAKSKSKSPSWSKDSESEQSKSEQSKSVEVKKTEELQVESRSSSEMEEGELEPEPMPETEPEKASDAAPKNEDQTSNTLDTDDKEIQTESQLNDTDTTMHEIMEELNKEEAKPEEVANSAGKIVEKDKKLPDVQNDPTAKVHDTKNEIETSVHNDNKAEESSKVETTCKGETKEGAEHEKPLLHEEEHKQDKGVDLETRAELHKEVSTENEVLKTDVESTMEIVTNNVKDKGKSVSVTANDVVHPSEDGLWNDRGPRDLTACSGDAMEGPSTRGFELFSRSPVRRAEKTDQSSLSKHKDGSLSMEELDLSLSLPNVLLPIGAHETAPAPGSPSQARSVQSLSTFRTNSEGFTASMSFSGSQSFYHNPSCSLTQNSIDYEQSVHSRPLFQGIDQVSHGGWQGMSQTDPKQKEIPYCQGTLINGSGSFSQSQPTWGISDGQAVKGQPSRVLEGSSKMASGLDRQLSFHKQLSGQSRRHGDVRSPSQSVGSHDIGSNYSFDKKREMRDRSNGSLYRTASQKEQEQFQMGGIEFVETIIAKIVSEPVPAMAKKFHEMSGQTLSCLKESIREIMLSADKRGQILAFQKVLQNRSDITLEVLLKAHRVQLEILVALKMGLVNFIQLDNSISSTHLAEIFLNLRCRNDLCRSQLPVDECDCKVCAPKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTECGLRESYIRNGPSATGVQGVPEMQFHCIACDHPSELFGFVKEVFLSFAKDWSVEALCKELEYVKRIFSASKDMRGRQLHGLADQMLLRLANKSNLQEVYSQIMSFLNDGDSSKLALTRNFSGKEQIKEKNAVAEPSQEAAWMKSIYSEKTPLLERPANILSSYDRNDKQAPPPQELLMNVQKDYCFDELESIIKIKLAEAKMFQTRADDARRDAEGLKRIALAKNEKIEEEYASRLSKLRLAETEEMRRQKVEEHQALERAHLEYFNMKMRMEADIKDLLLKMEATKRSLAM 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00302 1197 Pfam PHD - plant homeodomain finger protein 846 969 IPR032881 -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 675 700 - -
Accr15g00302 1197 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1195 IPR004082 -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 488 509 - -
Accr15g00302 1197 Coils Coil 1174 1194 - -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 702 716 - -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 118 140 - -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 531 550 - -
Accr15g00302 1197 Coils Coil 1146 1166 - -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 306 402 - -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 675 726 - -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 487 509 - -
Accr15g00302 1197 Coils Coil 300 320 - -
Accr15g00302 1197 CDD PHD_OBE1_like 876 935 IPR047578 -
Accr15g00302 1197 Pfam Coiled-coil region of Oberon 1074 1185 IPR032535 -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 18 36 - -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 284 298 - -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 1 16 - -
Accr15g00302 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1092 1112 IPR004082 -
Accr15g00302 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 883 903 IPR004082 -
Accr15g00302 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1131 1153 IPR004082 -
Accr15g00302 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 757 779 IPR004082 -
Accr15g00302 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 837 858 IPR004082 -
Accr15g00302 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 811 826 IPR004082 -
Accr15g00302 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 796 811 IPR004082 -
Accr15g00302 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 956 975 IPR004082 -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 1 402 - -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 148 256 - -
Accr15g00302 1197 Coils Coil 1116 1136 - -
Accr15g00302 1197 MobiDBLite consensus disorder prediction 56 97 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00302 846 1012 PHD Gene Family AT5G57380 25.668 3.52e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00302 - - ahf:112789425 1494.56