Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00300 ATGGAGGAAGTTCAGGAGCCTCAAACTCAGCCACTGGGTGGAGAAAATCAAGATGAAATAATTACTGAAAGTTCTGCTTTTGTTAAAGGGGAACCTCCTCAAGAAGTGAGTAATCCTCCTAAAGTTGACTCAGAGATTGAAGTCCTCCATGAGAATGTTACAAAACAAATAATTAAGGAAGGTCATGGTCAGAAGCCTACCAAATATTCAACATGCTTTTTTCATTACAGGGCATGGACCGAAAACACGCAGCACAAGTTTGAAGACACATGGGATGAGCAACGACCCATTGAAATGATATTAGGAAAAGAGAAGAAAGAATTGACTGGCTTGGCTATTGGTGTGGGCAGCATGAAAGCTGGAGAGCGTGCCTTACTGCGTGTGGGTTGGGAATTAGGATATGGAAAGGAAGGCAACTTCTCTTTTCCAAACGTTCCACCTATGGCAGATTTAGTTTATGAAGTTGAGCTCATAGGCTTTGATGAAACAAAAGAAGGAAAACCTCGCAGTGATATGACTGTTGAGGAAAGGATCGGTGCAGCAGACCGTAGAAAGATGGATGGAAATGCTTTCTTTAAAGAGGAGAAATTGGAGGAGGCCATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGGGATATGGCTTTGGCTGTAAAGAATCCTTGCCACCTTAACATGGCTGCATGTTTGATTAAGCTGAACCGTTATGATGAAGCCATAGGACAATGTAGCCTTGTGTTGAGTGAGGATGAAAACAATGTGAAGGCGTTATTTAGACGAGGCAAGGCTAGGGCAGCACTAGGCCAAACAGATGCTGCCAGGGAGGATTTTCTGAAAGCAAAGAAGTATGCCCCAGAAGATAAAGCAATAACAAAAGAATTGCGATCGCTTGCCGAACACGACAAGGCTCTTTATCAAAAGCAAAAAGAGATATATAAAGGAATGTTTGGACCGCGGCCTGAACCAAAACCCCAGCAAAGGAATTTTCTAATTCTTATTTGGCAGTGGTTGGTGGCGGTATTTCATTGCCTCATTATGCTCTTCAAGCGTGAAAGGCAAAAATCTGACTAA 1107 0.4255 MEEVQEPQTQPLGGENQDEIITESSAFVKGEPPQEVSNPPKVDSEIEVLHENVTKQIIKEGHGQKPTKYSTCFFHYRAWTENTQHKFEDTWDEQRPIEMILGKEKKELTGLAIGVGSMKAGERALLRVGWELGYGKEGNFSFPNVPPMADLVYEVELIGFDETKEGKPRSDMTVEERIGAADRRKMDGNAFFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYDEAIGQCSLVLSEDENNVKALFRRGKARAALGQTDAAREDFLKAKKYAPEDKAITKELRSLAEHDKALYQKQKEIYKGMFGPRPEPKPQQRNFLILIWQWLVAVFHCLIMLFKRERQKSD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00300 368 MobiDBLite consensus disorder prediction 9 23 - -
Accr15g00300 368 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 65 158 IPR001179 GO:0003755
Accr15g00300 368 SUPERFAMILY TPR-like 173 325 IPR011990 GO:0005515
Accr15g00300 368 Pfam Tetratricopeptide repeat 267 299 IPR019734 GO:0005515
Accr15g00300 368 Gene3D - 37 162 IPR046357 GO:0003755
Accr15g00300 368 Gene3D Tetratricopeptide repeat domain 163 294 IPR011990 GO:0005515
Accr15g00300 368 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 96 338 IPR039663 -
Accr15g00300 368 MobiDBLite consensus disorder prediction 1 41 - -
Accr15g00300 368 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 69 161 IPR001179 GO:0003755
Accr15g00300 368 FunFam Peptidylprolyl isomerase 166 294 - -
Accr15g00300 368 SUPERFAMILY FKBP-like 36 160 - -
Accr15g00300 368 ProSiteProfiles TPR repeat profile. 266 299 IPR019734 GO:0005515
Accr15g00300 368 SMART tpr_5 266 299 IPR019734 GO:0005515
Accr15g00300 368 SMART tpr_5 232 265 IPR019734 GO:0005515
Accr15g00300 368 SMART tpr_5 181 214 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00300 29 329 Calmodulin-binding Proteins AT3G25230 31.915 3.88e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00300 - - gmx:100790587 646.736