Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00289 ATGCCAGGAAAACCTGATGTGGAAGATAGGAGGTATGAAACTGGAGGAGGGCAGATTCAGTTTCAATCAGGAATTTATTCTCAGCCATGGTGGCGTGGTGTTGAGGAAAATGCCTCTAAATCATCATCTTCAGTATATCAGATAAGTGGTTCAGTGATGAATTCACCAGCTAAGGAAGGATCAGATAAAGTTGGTTTTCATAAGCAGACACAGCCTATGGTTTCATCTTCACTTTCTCCAGTTGGTGGGAATGCCAACAAAGAGCACCAAAACAACAAATATGTTATGTCGTCTTCACCACATGCCATGGGCAAACACCTTGGTTCAAATTCCCAGGCCGAACTTATCAGTCATTCCATTGTTTTAACCTCTTACCCTTACTCAGATGCACAGTATGGTGGAATCTTGACATCTCATGGGCCTCAAAACATGATAAATCCTCAGTTGTACGGAATGCACCATGCTAGAATGCCTTTGCCACTTGAGATGGAAGAAGAGCCTGTTTATGTCAATGCAAAGCAGTACCATGGTATCTTAAGGCGAAGGCAGTCACGTGCTAAGGCCGAGCTTGAAAGGAAAGTTATTAAAGTTAGAAAGCCATATCTTCACGAATCTCGCCACCTACATGCTATGAGAAGGGCAAGAGGGTGTGGGGGCCGCTTTCTGAATACAAAGAAGCTTGAAAATAACAATTCCAATGTTGCTTCAGAAAATGACAAGAACAATGGTTGTTCAAACCCTTTGTCAATATCTGCCAACACACCCTCCTCTGAGCATTCTCTACTCAACAATGAGATTTTCGGTTCATCAAAGAATCATCATGACATGTCGCTGTCCTTGGTTGGGAACACGCACAATGGAGGCTTATTTGGTCAAGAGAGGGGAAGCATGCAGATTCATGGAGCCTCTCATATGGCTATCAAATGA 927 0.4315 MPGKPDVEDRRYETGGGQIQFQSGIYSQPWWRGVEENASKSSSSVYQISGSVMNSPAKEGSDKVGFHKQTQPMVSSSLSPVGGNANKEHQNNKYVMSSSPHAMGKHLGSNSQAELISHSIVLTSYPYSDAQYGGILTSHGPQNMINPQLYGMHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELERKVIKVRKPYLHESRHLHAMRRARGCGGRFLNTKKLENNNSNVASENDKNNGCSNPLSISANTPSSEHSLLNNEIFGSSKNHHDMSLSLVGNTHNGGLFGQERGSMQIHGASHMAIK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00289 308 ProSiteProfiles NF-YA/HAP2 family profile. 164 224 IPR001289 GO:0003700|GO:0006355
Accr15g00289 308 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 166 221 IPR001289 GO:0003700|GO:0006355
Accr15g00289 308 Gene3D - 164 225 - -
Accr15g00289 308 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 41 281 IPR001289 GO:0003700|GO:0006355
Accr15g00289 308 ProSitePatterns NF-YA/HAP2 subunit signature. 169 189 IPR018362 GO:0003677|GO:0016602
Accr15g00289 308 SMART cbf3 163 224 IPR001289 GO:0003700|GO:0006355
Accr15g00289 308 MobiDBLite consensus disorder prediction 228 257 - -
Accr15g00289 308 PRINTS CCAAT-binding transcription factor subunit B signature 198 221 IPR001289 GO:0003700|GO:0006355
Accr15g00289 308 PRINTS CCAAT-binding transcription factor subunit B signature 167 189 IPR001289 GO:0003700|GO:0006355
Accr15g00289 308 MobiDBLite consensus disorder prediction 289 308 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00289 114 263 CCAAT-HAP2 Transcription Factor Family AT5G12840 51.333 1.33e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Accr15g00289 CBFB_NFYA 3.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00289 K08064 - gmx:100782085 296.204