Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00274 ATGGGGAAGGAGAAAATGAACATGAAGAACAACAATAGTAATAATAATAAGAGCAAAATGAGGAAAGGGCTGTGGTCGCCGGAGGAAGATGAGAAACTGATGAGGTTCATGCTGACGAATGGACAAGGTTGTTGGAGTGACATTGCCAGAAACGCCGGCCTCCTTCGCTGCGGCAAAAGTTGTCGCCTTCGTTGGATCAATTACCTCAGACCTGACCTCAAACGTGGTGCCTTTTCCCCTCATGAGGAACACCTCATCATTCACCTTCACTCTCTTCTTGGCAACAGATGGGCTCAAATTGCTGCACGTCTTCCTGGGAGAACAGACAATGAGATTAAGAATTTCTGGAACTCAACATTGAAGAAAAGGTTCAAAAATAACAACACTTCATCATCTTCATCACCAAACAACTCATCACCTTCTACATCCTCATCACCAGAACCTAAAAATCATGTCTTGATCAATGGAAACTCAAGCATGATCGACCCATTAATGCCCACGTCATCATCGTCCTCCTTGTCGTCGTCCATGCAAGTCCCGATCATTTTCGGAGATCAATTAGTTTCCGGTGATACCTTTTTCACATTGAATCATCATCATCATCATCATCATAATATTGAAGGAGCTGGTAATTTTCCTTTTTTACCTGCAACAGATCATGTTGGGAATATAGAAGAAGAAGGGCTTTATAATAATGATGGAGATTATGGGACAATATTACTAGAGCCAGCTGGTTGTAACAACATGGAAAGTGGCAGTAGGGGCAACAGTAATATTTGTGTCCCAAATTTTGATGATGATCTTATTAGTGTGAAAAGCCACTACAACAACCACTTTAATAATAGTTGCTTCAATTACACTAATGATCATCATCATCATCAAATAATTCAGAGCTCTATAAGTAAAGTAGAGCAATCAGAGGGCATGTTTGGGTTTGGAAATAGCAAGATCATCAATAATAATATTAATGAGCACTTTGAAGAAAACCTAATGGTGGGAGATCAATGGGATTTAGAAGGTCTGATGCAAGATATGTCTTCTTTTCCCTTCCATGATTTTTCCAAGATAGTCGAATAA 1077 0.3983 MGKEKMNMKNNNSNNNKSKMRKGLWSPEEDEKLMRFMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSPHEEHLIIHLHSLLGNRWAQIAARLPGRTDNEIKNFWNSTLKKRFKNNNTSSSSSPNNSSPSTSSSPEPKNHVLINGNSSMIDPLMPTSSSSSLSSSMQVPIIFGDQLVSGDTFFTLNHHHHHHHNIEGAGNFPFLPATDHVGNIEEEGLYNNDGDYGTILLEPAGCNNMESGSRGNSNICVPNFDDDLISVKSHYNNHFNNSCFNYTNDHHHHQIIQSSISKVEQSEGMFGFGNSKIINNNINEHFEENLMVGDQWDLEGLMQDMSSFPFHDFSKIVE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00274 358 CDD SANT 77 120 IPR001005 -
Accr15g00274 358 FunFam Myb transcription factor 77 124 - -
Accr15g00274 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 69 IPR017930 -
Accr15g00274 358 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Accr15g00274 358 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Accr15g00274 358 Gene3D - 76 149 - -
Accr15g00274 358 CDD SANT 25 69 IPR001005 -
Accr15g00274 358 MobiDBLite consensus disorder prediction 1 24 - -
Accr15g00274 358 MobiDBLite consensus disorder prediction 1 21 - -
Accr15g00274 358 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Accr15g00274 358 FunFam MYB transcription factor 19 75 - -
Accr15g00274 358 MobiDBLite consensus disorder prediction 124 172 - -
Accr15g00274 358 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Accr15g00274 358 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Accr15g00274 358 PANTHER MYB DOMAIN PROTEIN 55 12 304 - -
Accr15g00274 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Accr15g00274 358 SMART sant 21 71 IPR001005 -
Accr15g00274 358 SMART sant 74 122 IPR001005 -
Accr15g00274 358 Gene3D - 20 75 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00274 14 353 MYB Transcription Factor Family AT3G08500 45.506 7.92e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr15g00274 Myb_DNA-binding 6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00274 K09422 - cave:132161639 281.952