Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00270 ATGGAGGTGCATTACATAGATACGGGCTTTCCTTATACTGTTACAGAAAGCTTCATGAACTTCTTTGAAGGCATCACGTATGCGCCAGCGAATTGTCTCCACACCGGATCTGTGCCTTATCAGGAAAGTGCCAACTGGATGATGAATATGAGCCCATATAAATATGACATGTCTGGCCCTTTGTGTCCATCTTATTATGGTTATCCTGAATATATCCTTCCCTTACCAAGGATGGAGGTCAACAGGGGACAATGGGAAAGCCTTTCACCAATGACCATTGAGGAGCCTGCAGCAACAGACTCTTTGTCCAGAAGAGATGGAGTGGCTGGCATGCAGACCATTCCTGAAGAATGCAGCCCTAATCATCAAGATTCCCCTGGTACTCAGGTTGCATGGCAGCAAGACAGCATTGATCCCGACAACATGACTTATGAGGAATTACTGGACTTGGGTGAGGCAGTTGGAACTCAAAGTAGAGGCCTTTCTAAAGAACTTATTGATTCGCTTCCAGTCTCAAAGTACAATTTTAAAAGCATGTTTAAAAGAAAAAAATATGGGAAAAGGTGTGTAATCTGTCAGATGACATATAAAAGAGGTGACCAACAAATGAAATTGCCATGCACGCATGTTTACCATAGCGAATGCATCTCCAAATGGCTTAGCATTAACAAGAAGTGCCCAGTTTGCAACACTGAGGTGTTTGGCGAGGATTCAAGGAATTAG 723 0.4329 MEVHYIDTGFPYTVTESFMNFFEGITYAPANCLHTGSVPYQESANWMMNMSPYKYDMSGPLCPSYYGYPEYILPLPRMEVNRGQWESLSPMTIEEPAATDSLSRRDGVAGMQTIPEECSPNHQDSPGTQVAWQQDSIDPDNMTYEELLDLGEAVGTQSRGLSKELIDSLPVSKYNFKSMFKRKKYGKRCVICQMTYKRGDQQMKLPCTHVYHSECISKWLSINKKCPVCNTEVFGEDSRN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00270 240 SMART ring_2 189 229 IPR001841 -
Accr15g00270 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 234 IPR013083 -
Accr15g00270 240 SUPERFAMILY RING/U-box 188 234 - -
Accr15g00270 240 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 236 IPR033276 GO:0004842|GO:0016567|GO:0046621
Accr15g00270 240 ProSiteProfiles Zinc finger RING-type profile. 189 230 IPR001841 -
Accr15g00270 240 FunFam E3 ubiquitin ligase BIG BROTHER 151 234 - -
Accr15g00270 240 Pfam Ring finger domain 188 230 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00270 2 238 C3H Transcription Factor Family AT3G63530 51.464 1.13e-82 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00270 K19045 - gmx:100785290 342.043