Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00228 ATGAGTGTTATGTATAGTCCCAGTGTTCTGGATTACTCAGATGGAGAACTTAGGAGAAACCCAGAAATGGATTCAATTCACCACTTGAATTCTGGATTAATGAGGTACAGTTCTGCTCCAAGCTCATTTCTGGCAAGCCTGGTTCAGAATAGCCATGGATGTATGAATGAGGAAGCTTCTAGAAGCATAGATCATCATCACAATCTATCTTCAAGTTCAGAAATGGAAGCCATGTTGGCCAAGTTGGTTTCTTCGTCATCATCATCATCAAACAATGGATGGATCAAGCAGGAAGAAACAGGGGACTCTGTTTCAGAGGGACACAACGGGTATATTTCTAATTATGGTTCTCAGATGATTTACCAATCTCAGCAGACTCATCAAGCTGTTCAAGGCTTGCCAAATGGGTCTTTAGGTTCTTCTGGGAATTCTTTTGATGGCTCATTCAATTCCACTGAGTCCAAAATGATAAGGCCTAATAATCTCCTTAGGCAGAAAAGTTCCCCTGCTGGATTGTTCAACAATTTCTCAGTTGAAAATGATTTTGCAACATGGAGAGATGTGGGAAGCTTTAGAGGATGTGATCATGTCTCAAATGGTCAAGCTCCTACATCAGCTAGTGTGTTAGATGAGAAAAATACTTTGACCTTTTCATCTAGGCCATCTTCTTGTTCAAGACAATTGCCTGATATAGCTGAAGATGCGAATGAAACCCTAGAAGAAGAAACTTGTGTTGACACTAGAAGAAATCTGAGAAATGACAACAATGGCAACAACAACAACAACACTGAATGTTACATTCCCAGCATCACAAGTGACTTCTGGGATGGTACTTCATTTAATGACACTAAAACAGCTAGTGACAATGATGAACTCATGTTCACTACTACTTCAAATGGTTTTGAAACTCAGACTGCTGATTTTGGGTATCAGAATGTTGGGTTGACTCATCATTTGAGTTTGCCAAGTTCTTGTACAAAGTCAAAGATGAGTGCCATTGAGAAGTTTCTTCAAGTTCAAGAATCTGTTCCTTGTAAGATTCGAGCAAAAAGAGGTTTCGCCACTCACCCACGGAGCATTGCAGAGAGGGTAAGAAGAACAAGAATCAGTGAAAGAATAAAGAAGTTGCAAGATCTCTTCCCAAAATCTGAAAAGCAAACAAGCACAGCTGATATGTTGGATTTGGCAGTTGATTATATCAGAGACTTGCAGAAACAAGTTCAGATGCTCACAGATACTAAAGCAAAGTGCAAGTGTTCAAGTAACCAGAAGCAGAACTCAGTGACTTGTAGCTAG 1296 0.3989 MSVMYSPSVLDYSDGELRRNPEMDSIHHLNSGLMRYSSAPSSFLASLVQNSHGCMNEEASRSIDHHHNLSSSSEMEAMLAKLVSSSSSSSNNGWIKQEETGDSVSEGHNGYISNYGSQMIYQSQQTHQAVQGLPNGSLGSSGNSFDGSFNSTESKMIRPNNLLRQKSSPAGLFNNFSVENDFATWRDVGSFRGCDHVSNGQAPTSASVLDEKNTLTFSSRPSSCSRQLPDIAEDANETLEEETCVDTRRNLRNDNNGNNNNNTECYIPSITSDFWDGTSFNDTKTASDNDELMFTTTSNGFETQTADFGYQNVGLTHHLSLPSSCTKSKMSAIEKFLQVQESVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVDYIRDLQKQVQMLTDTKAKCKCSSNQKQNSVTCS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00228 431 Pfam Helix-loop-helix DNA-binding domain 359 404 IPR011598 GO:0046983
Accr15g00228 431 Gene3D - 355 428 IPR036638 GO:0046983
Accr15g00228 431 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 353 403 IPR011598 GO:0046983
Accr15g00228 431 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 355 419 IPR036638 GO:0046983
Accr15g00228 431 FunFam Transcription factor bHLH130 family 354 423 - -
Accr15g00228 431 SMART finulus 359 409 IPR011598 GO:0046983
Accr15g00228 431 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 39 423 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00228 23 409 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 33.985 2.07e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr15g00228 HLH 6.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00228 - - gmx:100795896 422.55