Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00207 ATGATTATGGAGCTTGGGTTGAGCTTAGGAGCTTCTTCAAAGTCTTTCACTTTCATGGAAAAGCCACAATCTTACAATAACCAACAAGAAGGCGACTTAAGCCTCAACACTGCCTTATCGATTGGTCCGATGATCAGTAACACCAGCAAAAGCTGTGACGACGACGACGAAGATGAAGATCGAGAAGAAGCCAAGAAGGAAAATCATCACAATATTACTACTATCAAAGAAGATCATCATCATCAAGCTGCTGCTTCTCTTTCCTCTTCTTCCTCACAGCTCCATCATCTTCTTCCTCACAGTTCCAAGCCTGTACCTCTCTCTTCCTTCTCATGGCCTCCTCCTGATAACTGTGATGAAGTGGGAGCAAATAATTCGGTGAGGGGTTTGAAGGTGAAGACGAAGGCGGAGGAGGAAGAGTCGGAGGAGAGGACGGTGCTATCGTCGTCTCCGATGAGCGGAGCGTCGTCGTTTCAGGTGGATCTGTGCATATACAGTAGTAATAATAATAAATCAGGAAATTATTACAGTAACAGAAGGAGGAAGTTGATGATGAATGAATCAGAAGGTGATGAAGGTAATTATAGTTATTACGATCATCAAAGGGGTTGTTCATCAAGAGCAAGCGATGAAGACGACGTCGGAGTTCGTGGTGGTAGTGGTGGCAGCGGTACCAGGAAGAAGCTGAGGCTTTCTAAAGAACAATCAGCTTTTCTTGAAGAAAGCTTCAAGGAACACAGTACTCTCAATCCTAAACAAAAACTTGCTCTTGCCAAACAACTCAATCTTCGTCCTCGTCAAGTCGAAGTCTGGTTTCAAAACCGAAGAGCAAGGACGAAGCTGAAGCAGACGGAAGTGGACTGCGAATACTTGAAGAGATGCTGCGAGACGCTATCAGAAGAGAACAGGAGGCTGCAGAAGGAGCTTCAAGAACTGAGGGCTTTGAAGGCTTCAAATTCAAACCCTTTCTTCATGCAATTACCAGCCACCACCTTGACCATGTGCCCTTCCTGTGAGCGCCTCGCGCCCAATAATCATAATAATAATAACAATTCCTCCTCCAATAATAATAATAATAATAACAACAACAATAATTCTCCTTCTTCTTCCAAACCAGTTGTTGCCTTCCCCTTTGCCAAACCCAAGTTCTATCCTTTTCCTCACTCCAAACCACACCAGTCTTGA 1185 0.4422 MIMELGLSLGASSKSFTFMEKPQSYNNQQEGDLSLNTALSIGPMISNTSKSCDDDDEDEDREEAKKENHHNITTIKEDHHHQAAASLSSSSSQLHHLLPHSSKPVPLSSFSWPPPDNCDEVGANNSVRGLKVKTKAEEEESEERTVLSSSPMSGASSFQVDLCIYSSNNNKSGNYYSNRRRKLMMNESEGDEGNYSYYDHQRGCSSRASDEDDVGVRGGSGGSGTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLSEENRRLQKELQELRALKASNSNPFFMQLPATTLTMCPSCERLAPNNHNNNNNSSSNNNNNNNNNNNSPSSSKPVVAFPFAKPKFYPFPHSKPHQS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00207 394 ProSiteProfiles 'Homeobox' domain profile. 222 282 IPR001356 GO:0003677
Accr15g00207 394 SMART halz 282 327 IPR003106 GO:0006355|GO:0043565
Accr15g00207 394 MobiDBLite consensus disorder prediction 343 374 - -
Accr15g00207 394 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 68 363 - -
Accr15g00207 394 FunFam Homeobox-leucine zipper protein 18 210 287 - -
Accr15g00207 394 MobiDBLite consensus disorder prediction 62 83 - -
Accr15g00207 394 Pfam Homeobox associated leucine zipper 282 316 IPR003106 GO:0006355|GO:0043565
Accr15g00207 394 ProSitePatterns 'Homeobox' domain signature. 257 280 IPR017970 GO:0000981|GO:0006355
Accr15g00207 394 SMART HOX_1 224 286 IPR001356 GO:0003677
Accr15g00207 394 Coils Coil 288 318 - -
Accr15g00207 394 MobiDBLite consensus disorder prediction 206 229 - -
Accr15g00207 394 MobiDBLite consensus disorder prediction 132 154 - -
Accr15g00207 394 CDD homeodomain 226 283 IPR001356 GO:0003677
Accr15g00207 394 Pfam Homeodomain 226 280 IPR001356 GO:0003677
Accr15g00207 394 MobiDBLite consensus disorder prediction 343 372 - -
Accr15g00207 394 MobiDBLite consensus disorder prediction 42 104 - -
Accr15g00207 394 SUPERFAMILY Homeodomain-like 212 283 IPR009057 -
Accr15g00207 394 Gene3D - 230 280 - -
Accr15g00207 394 MobiDBLite consensus disorder prediction 84 98 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00207 188 386 Homeobox Transcription Factor Family AT4G37790 55.721 1.11e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr15g00207 Homeodomain 2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00207 K09338 - gmx:100805312 289.656