Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00196 ATGTCTCTTCTTTTTGCATTATATGTTTTTTCTTACATCATTTTTCTCTGTATATCATCATCAACCGCTCTAGACATCACCACAGATACAGAAGCTTTGATCTCATTTAAGTCTCAATTGAGTAATACAGAAGCTTTATCTTCTTGGAATCATAGTTCATCATCACCCTGCAACTGGCATGGTGTAACCTGCAACAGGCTTCGTCAAAGAGTTATAGGCTTAAATCTTTCAGGCCTAAGACTCTCAGGTCAGTTAAGTCCTAGTTTAGGTAATCTCACTTTTCTTGAGTCTATCCAGTTGCAGAAAAACCAATTCACAGGAGTGATTCCTGAGCAAATTGGCCATCTAGTTCGGTTAAGAGCTCTAGACATGAGTTCTAACAGTATAGAGGGTATGCTTCCTTCAAACATCACTCGCTTGACCAAACTTGTGACACTCGACTTATCCGCAAACACAATAGCCAGCAAAATTCCTCAAGATATTGACAGCTTGACAGAGCTTCAAGTCTTGAGATTAGGAAGCAATAGATTGTATGGAATAGTTCCACCAACTCTTGGGAATATTTCATCTCTTGCAAATATCAGTCTTGGCACAAACAGTCTAAGTGGTGGGATTCCCAGTGAATTAGGTAAGCTCAAGAACTTAATAGAGCTTGATCTCACTATTAACAAACTCACTGGGACTATTCCTTCTTCTATATATAACTTATCTTCCCTAGTTAACTTGGCTATCGCTTCCAACGATTTTTGGGGTGATATTCCTCAGGATGTTGGACAAAGACTTCCAAAACTTGTAGTGTTCAATATCTGCTTTAATAGATTCACAGGCAGAATTCCTTGGTCTTTGCACAATCTCACCAACATTCAAGTTATTCGCATGGCTTCAAACCTTTTGGAAGGAACCGTGCCACCAGGTCTTGAAAATCTTCCCTTCCTTCGTATGTACAATATAGGGTACAATAGGATAGTAAGTTCAGGAGATAGAGGCCTAGACTTCATTACCTCATTGGCAAACAGCACTCTCTTGAACTTTCTTGCAGTTGATGGCAATAGGCTGGAAGGTGTAATTCCAGAGACCATTGGAAATCTCTCCAAGGTTCTCTCAAAATTATACATGGGAGAGAATCGTTTCCATGGAAACATACCCCCTTCAATTGGAAATCTTAGAGGCTTGAGTTTATTAAACTTGAGTCACAATACAATCTCAGGAGAAATTCCTGTCAAGTTAAGCCAACTGGAAAACTTACAAGAACTCAGTCTGGCTGGGAATCAGATATCTGGAACTATTCCAAACTCCCTTGGGCGTCTCCAAAAGCTGAATAGTCTTGATTTGTCACGCAATGAGCTTGTGGGTGAAATACCTTCAAGTTTTGGGAATTTTCAAGACATTGATTCCATTGACTTATCTTACAACAAGCTCAATGGAAGCATACCAAGAGAAGTACTCAGTCTCTCATCTCTCACCACTTATTTAAACGTTTCTAAGAACCTTTTAAGTGGATCTTTGCCTCAAGAAATAGGGGCTTTGATCAAAGTTTCAACCTTAGACTTCTCAGACAACCTTTTAGACGGTGAAATCCCCAGTTCAATTAGCAACTGTATAAGCCTAGAATATCTTTTTTTGGAACGAAATATGCTTTCTGGTCTTATTCCAAAAGCTCTTGGAAGCATCAGAGGCTTGGAAATTCTAGACCTTTCCTCCAACAAAATCTCTGGATCTGTTCCTGTTGAACTTCAAAATCTAAATGCCCTTCAGTTATTGAACCTTTCTTATAATGACTTAGAAGGAGTCATTCCCAGTGGTGGAGTTTTCAAAAATATCTCTTCTTTCCATTTTGATTTTGAAGGCAATAAGAAATTGTGCTCGCTCTCCTCATGTGTTGCTCAAGGGCAAGGAAGAAAGATGCTCATAATTTATATCACCGTACCTGTTGTGGTAACATTGGTACTATGTTTCGCGTTTGGCTTTCTGCTGTATGTGGGGAGAAGAAAAACAAAGGCAATAACACCACTTGAAATGGCAAAGCCACATCATCCAATGGTCTCTTATGATGAGCTTCGACGAGCGACTGGAAACTTCAGCCAAGAAAATTTACTGGGAATTGGAAGTTTTGGTTCGGTCTATAGAGGCTTTCTTAGTGAAGGGAATGCTGTTGCAGTAAAAGTCCTAGATACTTTAAGATCAAGCTCCTTGAAGAGTTTCTATGCAGAATGTGAGGCATTAAGGAATGTAAGGCATCGAAATCTGGTTAAGCTCATCACATCATGTTCCAGTATGGACTTCAAGAACCAAGAATTTCTGGCTTTGGTTTATGAGTTCATATGTAACGGCAACTTGGATGATTGGATTAAGGGAAAGAGAAAGCATGCTAATGGAAATGTGTTGAATCTTATGGAGAGACTGAACATTGCTATTGGTGTTGCTTGTGCATTGGATTATCTGCACCATGACACTGAAACTCCTATTGTGCACTGTGATTTGAAGCCTAGCAATATTCTTCTGTGTGAAGATATGACTGCAAAGGTGGGTGATTTTGGATTAGCCAGATTGTTGATTGAAAGACCAACTAATCAAGTTTCAATAAGCTCCACTCATGTTCTCAAAGGTTCATTCGGTTACATACCTCCAGAGTATGGATGGGGAGAAAAGCCATCAGTAGCAGGAGATACGTACAGTTTTGGAATTGTGTTGTTGGAGCTCTTTTCTGGGAGGAGCCCAACAGATGATAGCTTCACAGGTGGGTCAAGCTTAACAAGATGGGTTCAATCAGCTTTCCCAGACAAGTCTGAGCAAGTCATAGACCCTCAGCTTCTATCACAGATTTTTCACAATGACCTTGCTGATGATAAAGGTCCAAATCTACAACTTGATTGTGTGACTGCAGTTTTGGGAGTTGGGTTATCCTGCACTGCAGAATCCCCAGATGGACGCCTTAAGATGAAAGATGCTGTTGCAAAATTAAAACTTGTCAGAGATAATTTTTCCAAGCTCAATCAAAACAAGGGCCCTTCAAGGCATTAG 3021 0.3995 MSLLFALYVFSYIIFLCISSSTALDITTDTEALISFKSQLSNTEALSSWNHSSSSPCNWHGVTCNRLRQRVIGLNLSGLRLSGQLSPSLGNLTFLESIQLQKNQFTGVIPEQIGHLVRLRALDMSSNSIEGMLPSNITRLTKLVTLDLSANTIASKIPQDIDSLTELQVLRLGSNRLYGIVPPTLGNISSLANISLGTNSLSGGIPSELGKLKNLIELDLTINKLTGTIPSSIYNLSSLVNLAIASNDFWGDIPQDVGQRLPKLVVFNICFNRFTGRIPWSLHNLTNIQVIRMASNLLEGTVPPGLENLPFLRMYNIGYNRIVSSGDRGLDFITSLANSTLLNFLAVDGNRLEGVIPETIGNLSKVLSKLYMGENRFHGNIPPSIGNLRGLSLLNLSHNTISGEIPVKLSQLENLQELSLAGNQISGTIPNSLGRLQKLNSLDLSRNELVGEIPSSFGNFQDIDSIDLSYNKLNGSIPREVLSLSSLTTYLNVSKNLLSGSLPQEIGALIKVSTLDFSDNLLDGEIPSSISNCISLEYLFLERNMLSGLIPKALGSIRGLEILDLSSNKISGSVPVELQNLNALQLLNLSYNDLEGVIPSGGVFKNISSFHFDFEGNKKLCSLSSCVAQGQGRKMLIIYITVPVVVTLVLCFAFGFLLYVGRRKTKAITPLEMAKPHHPMVSYDELRRATGNFSQENLLGIGSFGSVYRGFLSEGNAVAVKVLDTLRSSSLKSFYAECEALRNVRHRNLVKLITSCSSMDFKNQEFLALVYEFICNGNLDDWIKGKRKHANGNVLNLMERLNIAIGVACALDYLHHDTETPIVHCDLKPSNILLCEDMTAKVGDFGLARLLIERPTNQVSISSTHVLKGSFGYIPPEYGWGEKPSVAGDTYSFGIVLLELFSGRSPTDDSFTGGSSLTRWVQSAFPDKSEQVIDPQLLSQIFHNDLADDKGPNLQLDCVTAVLGVGLSCTAESPDGRLKMKDAVAKLKLVRDNFSKLNQNKGPSRH 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00196 1006 ProSiteProfiles Protein kinase domain profile. 693 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00196 1006 Gene3D Phosphorylase Kinase; domain 1 674 773 - -
Accr15g00196 1006 CDD STKc_IRAK 699 988 - -
Accr15g00196 1006 Gene3D Ribonuclease Inhibitor 79 328 IPR032675 -
Accr15g00196 1006 SUPERFAMILY Protein kinase-like (PK-like) 672 988 IPR011009 -
Accr15g00196 1006 SMART LRR_sd22_2 412 444 - -
Accr15g00196 1006 SMART LRR_sd22_2 212 238 - -
Accr15g00196 1006 SMART LRR_sd22_2 509 532 - -
Accr15g00196 1006 SMART LRR_sd22_2 164 190 - -
Accr15g00196 1006 SMART LRR_sd22_2 557 583 - -
Accr15g00196 1006 SMART LRR_sd22_2 140 163 - -
Accr15g00196 1006 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 774 1000 - -
Accr15g00196 1006 SMART LRR_typ_2 212 236 IPR003591 -
Accr15g00196 1006 SMART LRR_typ_2 436 459 IPR003591 -
Accr15g00196 1006 SMART LRR_typ_2 533 556 IPR003591 -
Accr15g00196 1006 SMART LRR_typ_2 484 509 IPR003591 -
Accr15g00196 1006 SMART LRR_typ_2 412 435 IPR003591 -
Accr15g00196 1006 SMART LRR_typ_2 164 187 IPR003591 -
Accr15g00196 1006 SMART LRR_typ_2 581 606 IPR003591 -
Accr15g00196 1006 SMART LRR_typ_2 116 140 IPR003591 -
Accr15g00196 1006 SMART LRR_typ_2 557 580 IPR003591 -
Accr15g00196 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Accr15g00196 1006 Gene3D Transferase(Phosphotransferase) domain 1 774 1003 - -
Accr15g00196 1006 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 222 328 - -
Accr15g00196 1006 Pfam Leucine Rich Repeat 438 460 IPR001611 GO:0005515
Accr15g00196 1006 SMART serkin_6 693 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00196 1006 Coils Coil 980 1000 - -
Accr15g00196 1006 FunFam Leucine-rich repeat receptor-like protein kinase 26 183 - -
Accr15g00196 1006 SUPERFAMILY L domain-like 366 624 - -
Accr15g00196 1006 FunFam LRR receptor-like serine/threonine-protein kinase EFR 329 630 - -
Accr15g00196 1006 ProSitePatterns Protein kinases ATP-binding region signature. 699 721 IPR017441 GO:0005524
Accr15g00196 1006 FunFam LRR receptor-like serine/threonine-protein kinase EFR 664 773 - -
Accr15g00196 1006 Gene3D Ribonuclease Inhibitor 18 78 IPR032675 -
Accr15g00196 1006 Gene3D Ribonuclease Inhibitor 329 628 IPR032675 -
Accr15g00196 1006 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Accr15g00196 1006 Pfam Protein tyrosine and serine/threonine kinase 696 984 IPR001245 GO:0004672|GO:0006468
Accr15g00196 1006 Pfam Leucine rich repeat 95 153 IPR001611 GO:0005515
Accr15g00196 1006 Pfam Leucine rich repeat 367 425 IPR001611 GO:0005515
Accr15g00196 1006 Pfam Leucine rich repeat 535 594 IPR001611 GO:0005515
Accr15g00196 1006 SUPERFAMILY L domain-like 30 323 - -
Accr15g00196 1006 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 224 986 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00196 28 996 Receptor kinase-like Gene Family AT3G47570 42.026 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Accr15g00196 PK_Tyr_Ser-Thr 6.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00196 - - gmx:100783512 1318.91