Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00160 ATGCCAGGAACTGGACAAGTGACAGTTCCTCCAGGCTTCAGGTTTCACCCAACAGATGAAGAACTTCTTTACTATTACCTGAGGAAGAAGGTCTCTTATGAAGCCATTGACCTTGACGTCATCAGAGAAGTTGATCTTAACAAGCTTGAACCGTGGGACCTCAAAGACAAGTGCAGAATTGGATCAGGGCCACAGAACGAGTGGTATTTATTCAGCCACAAGGACAAGAAGTACCCAACAGGAACAAGAACAAATAGGGCAACTACAGCTGGGTTTTGGAAGGCCACAGGAAGGGACAAGGCCATTTATCTCACTAATTCTAAGAGGATTGGCCTGAGGAAAACCCTTGTCTTCTACACCGGCCGTGCTCCTCACGGCCTAAAGACCGATTGGATCATGCACGAGTATCGTCTCGATGAAGATGACATCCACGTTCAGGAAGATGGGTGGGTTGTGTGTAAGGTTTTCACAAAGAAGAACCTGAATAGAGGCTACCAAACAACAGAAAAGGAAGAAGAAGAAGGGTACTTAGCTAGCCAAATGAGAACAAAAAGTGGATCAAACCAGAACCAAGCATTAGACCCAAAACAACAACACTACCTTCATCATCATCACATGCAAGCACTATATGATCATCATCATCAACAACAAAACTATAGCCTTGAAGGATCAACACAAAATCTTCCCCAATTATTCAGTCCTGAATCTGCTGCGGTTTTACCGGCGGCCGCTGCCATCGACCAAGCAGTCGAGTGCTCTCAGAACTTGTTGAGGCTCACAAGCACAACAACCAGTGGTGGTGGACTAAATCTTAATCTCAATCATTATAATAATGACGATCACTGGTCATTTTTGGACAAGCTTCTTGCTTCACAAAACCACAGATACGTGTCTTCACATGACCATCACGCTGGTTTGGCTTTTTCAACCTTCCAAAAATTCCCCGCTTCTGTTCATTACCTTGGTTGTGACCCTCGTGACCTTGTCAGGTTCTCTAAGTAG 1002 0.4481 MPGTGQVTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYLFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLTNSKRIGLRKTLVFYTGRAPHGLKTDWIMHEYRLDEDDIHVQEDGWVVCKVFTKKNLNRGYQTTEKEEEEGYLASQMRTKSGSNQNQALDPKQQHYLHHHHMQALYDHHHQQQNYSLEGSTQNLPQLFSPESAAVLPAAAAIDQAVECSQNLLRLTSTTTSGGGLNLNLNHYNNDDHWSFLDKLLASQNHRYVSSHDHHAGLAFSTFQKFPASVHYLGCDPRDLVRFSK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00160 333 FunFam NAC domain-containing protein 18 162 - -
Accr15g00160 333 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 218 - -
Accr15g00160 333 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Accr15g00160 333 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Accr15g00160 333 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Accr15g00160 333 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00160 1 291 NAC Transcription Factor Family AT1G79580 57.878 2.66e-111 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr15g00160 NAM 4.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00160 - - qsa:O6P43_029444 402.134