Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00147 ATGGCTACCACCACAACCGCCGCCGCACCTCCGCGTGAGATGTCCCAGAAGGAGGCTGATATCCAGATGATGTTGGCCGCTGAGGTCCACCTCGGAACCAAAAACTGCAACTTCCAAATGGAGCGCTATGTGTTTAAGCGTCGCAACGATGGTATCTACATTATTAATCTCGGAAAAACATGGGAGAAACTTCAACTTGCTGCTAGGGTTATTGTTGCCATTGAGAACGCTCAAGATATTATTGTTCAGTCTGCTAGACCTTATGGTCAAAGAGCTGTTCTCAAGTTTGCTCAATACACTGGTGCCCATGCACTTGCTGGGAGACACACCCCAGGAACCTTCACTAATCAGCTCCAGACCTCCTACAGTGAGCCTCGCCTCCTAATTCTAACTGATCCAAGAACGGACCATCAGCCCATCATGGAAGCTGCTCTTGGAAACATACCAACCATTGCTTTTTGTGACACTGATTCTCCCATGCGATATGTTGATATTGGGATTCCTGCCAATAACAAGGGGAAACATAGCATTGGTTGTCTTTTTTGGCTTTTAGCAAGGATGGTACTGCAGATGCGGGGCACTATTCGTCCTGGGCTTAAGTGGGATGTTATGGTGGACTTGTTCTTCTACAGAGAACCTGAGGAGACTAAGCAACTTGAGGAAGAGGAGGTGCCTGCTGTCCAAGAGTACACTGGTGCAGATTTCAGTGCCAGTATTGGTGCCATTGCTGATGGCCAGTGGCCTGTTGCAGCTGATCAATCATGGACTGAACCAGTACCACAATCTATTCCAGCAGGTCCTGGTGTCAGCTGGACCCCAGAAGCTGCTGCTGGGGATTGGGGTGAAGCTCTCCCAGCTCCACAAGCTCCTGTTACCGGAGTTCAGAACATCACTGCCACCGGCTGGGATTAA 912 0.4956 MATTTTAAAPPREMSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENAQDIIVQSARPYGQRAVLKFAQYTGAHALAGRHTPGTFTNQLQTSYSEPRLLILTDPRTDHQPIMEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEETKQLEEEEVPAVQEYTGADFSASIGAIADGQWPVAADQSWTEPVPQSIPAGPGVSWTPEAAAGDWGEALPAPQAPVTGVQNITATGWD 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00147 303 ProSitePatterns Ribosomal protein S2 signature 1. 21 32 IPR018130 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 NCBIfam 30S ribosomal protein S2 16 212 IPR005707 GO:0003735|GO:0006412|GO:0015935
Accr15g00147 303 ProSitePatterns Ribosomal protein S2 signature 2. 125 149 IPR018130 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 Pfam Ribosomal protein S2 24 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 Pfam Ribosomal protein S2 122 188 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 CDD RPS2 24 190 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 SUPERFAMILY Ribosomal protein S2 16 206 IPR023591 -
Accr15g00147 303 FunFam 40S ribosomal protein SA 20 226 - -
Accr15g00147 303 Gene3D - 20 225 - -
Accr15g00147 303 PANTHER 40S RIBOSOMAL PROTEIN SA 11 290 IPR005707 GO:0003735|GO:0006412|GO:0015935
Accr15g00147 303 MobiDBLite consensus disorder prediction 280 303 - -
Accr15g00147 303 PRINTS Ribosomal protein S2 signature 100 117 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 PRINTS Ribosomal protein S2 signature 21 39 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 PRINTS Ribosomal protein S2 signature 125 142 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 PRINTS Ribosomal protein S2 signature 163 177 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 PRINTS Ribosomal protein S2 signature 51 60 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 PRINTS Ribosomal protein S2 signature 142 153 IPR001865 GO:0003735|GO:0005840|GO:0006412
Accr15g00147 303 Hamap 40S ribosomal protein SA [rps-0]. 8 258 IPR027498 GO:0003735|GO:0006412|GO:0015935
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00147 1 286 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 72.222 3.73e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00147 K02998 - gmx:548014 501.901