Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00138 ATGGCAGCAATAAGTGAAGCCCAATCTCTCCCAGGTTGTCGCGAAAAATGTGGAGATGTGGACATTCCTTATCCATTTGGTGTAGGCCAACAACCTAATACTTCTCGAAACTGTTTCTTGGATTATCAGTCATTATTCAACCTCACCTGTAACAACTCCACATCTAAGTTATACTTCTTCAACGTGCCAGTTTCCAACATATCCCTCCAACAAAGTCAAATGGAAATCTCCATGAACATCTCCAAGGATTGTTACAACCAATCACAACCATCTGTTCCTTACATTCTCAAGACCGGTGCTTTCACCATTTCTAGGAACCAAAACAAGTTCGTAACCATTGGTTGTGACGCGGTCGGCTACTTCGGTACAATGGAGACCAACTTCACTGCTGACAGTGGTTGTGTGGCCATATGTGACAAACCTCCTCCAAGAGAGATAATCATGACTGATGATAAGACTTGTTCTGGGACTGGTTGTTGTCAGGTGGATTTTGGAGCGGGAATTAATAACATTGTTATTCAAGCTGCTAGCCTCTCTAATCATACCAACGTGTCTAGATTCAACAATTGTACATATGCTTTGGTTGTGAAACGTGACTGGTTTAGTTTCTCACTAGATTATCTGAGTAATTTTCCCTATGATGTGGTCCCTGTCGTCCTAGAATGGACTGTTTCGAATGATTCTTGTCGAAATGCTTCGGGCAAACAAGATTATGCCTGCAAATCCAACTCAGAGTGTGTGGATTCTGGTTATGGAGTTGGCTACAATTGCAGATGCAAATCCGGCTTTGAGGGAAATCCATATCATCCAGATGGATGTCACGATATCGATGAGTGCGCCATACCCAATATCTGCCCTATGCGACGGAGATGCCACAATCATCCTGGTTACTACAACTGTTCTTGTCCACCTGGATTGAAGGACAATGGAACTGCCTGCACCCTTCCTTATTTGCTTATTCTCATTCCATTAGGTGTGAGTGTCGCCTTGTTATTTGTCATTGCAATGGTCTTCACATTATGCTGGGTAGACAAGCAGAGAACTTTGAAACAACTCAGACAAAAGAATTTCCAGCAAAATGGAGGAGACTTATTGCTACAACAACTTTCGCAACAACAAGACTACAGTACTACTCACACTAAAATATTTACAGAAGTTGAGCTCAAAAATGCCACAAACAACTTTGATGAAAGCCGAATACTTGGTCAAGGAGGACAAGGCATAGTTTATAAGGGTATATTACTGGACGACACAGTTGTTGCCATTAAGAAGTCCAGAGCAGGAGGGGATTCGAAACAAATTAAGGATTTCATCAATGAAGTGTTTGTGCTCTCTCAAATCAATCATCGTAATGTGGTCAAACTTTTGGGGTGTTGTCTTGAAACTAATGTTCCTTTGCTGGTATATGAGTTTGTGGATAATGGCACTCTTCTTTATCACATTGACCCTTTGAAGAATGATATTTCAATTCCTTGGGAGACCCGATTAAGGATAGCTGCAGAAACTGCTAATGCTATTTCATATTTGCACTCTTATGCTTCCATTCCAATTATTCATCGGGATATTAAATCTACCAACATACTTTTAGACCATAATCTTGTAGCAAAGGTGTCTGACTTTGGAGCTTCAAGACTTGTCCCTATCGATGAAACCCATGTTACCACTGTTGTACAAGGGACTCTAGGATACTTGGATCCAGAGTATCTTCACATTGGTCAGCTGAATGAGAAGAGTGACGTTTATAGCTTTGGAGTTGTACTTATAGAGTTACTCACTGGAAGTAAAGCAGTTGAACTCAGCAGGGAGGAGAAGAAATATTTGGCAAATTATTTTGAGTCTTCAATGAAAGAAGATCATTTGTTGGAAATTCTAGACAAACGAGTGTTAAACGAAAAGAATGAACATCAGCTTCAAGAAGTAGCCTTGTTGGCAAGGAGATGTGTAAGAGTAAAAGGTGAGGAAAGACCCACAATGAAGGAAGTAGCAATGGAGCTAGAAGGTATGATTTCCTTGGAAAAGCATCGTTGGGTGAAAGGGGAAGAAATTGCATCAGAAGAAAGTGAATACTTACTTGGTCATGTGCCAGAGGCAAATGGTGCTAGTACTTCAGTTTCCTATGGTAGCAGCATATTGAAGGAGATTGCATTTGAGATTGCAGATGGACGATGA 2169 0.4089 MAAISEAQSLPGCREKCGDVDIPYPFGVGQQPNTSRNCFLDYQSLFNLTCNNSTSKLYFFNVPVSNISLQQSQMEISMNISKDCYNQSQPSVPYILKTGAFTISRNQNKFVTIGCDAVGYFGTMETNFTADSGCVAICDKPPPREIIMTDDKTCSGTGCCQVDFGAGINNIVIQAASLSNHTNVSRFNNCTYALVVKRDWFSFSLDYLSNFPYDVVPVVLEWTVSNDSCRNASGKQDYACKSNSECVDSGYGVGYNCRCKSGFEGNPYHPDGCHDIDECAIPNICPMRRRCHNHPGYYNCSCPPGLKDNGTACTLPYLLILIPLGVSVALLFVIAMVFTLCWVDKQRTLKQLRQKNFQQNGGDLLLQQLSQQQDYSTTHTKIFTEVELKNATNNFDESRILGQGGQGIVYKGILLDDTVVAIKKSRAGGDSKQIKDFINEVFVLSQINHRNVVKLLGCCLETNVPLLVYEFVDNGTLLYHIDPLKNDISIPWETRLRIAAETANAISYLHSYASIPIIHRDIKSTNILLDHNLVAKVSDFGASRLVPIDETHVTTVVQGTLGYLDPEYLHIGQLNEKSDVYSFGVVLIELLTGSKAVELSREEKKYLANYFESSMKEDHLLEILDKRVLNEKNEHQLQEVALLARRCVRVKGEERPTMKEVAMELEGMISLEKHRWVKGEEIASEESEYLLGHVPEANGASTSVSYGSSILKEIAFEIADGR 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00138 722 ProSiteProfiles EGF-like domain profile. 225 274 IPR000742 -
Accr15g00138 722 FunFam Wall-associated receptor kinase 2 364 471 - -
Accr15g00138 722 FunFam Fibrillin 2 270 314 - -
Accr15g00138 722 CDD STKc_IRAK 401 668 - -
Accr15g00138 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Accr15g00138 722 SMART serkin_6 395 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00138 722 ProSiteProfiles Protein kinase domain profile. 395 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00138 722 SUPERFAMILY Protein kinase-like (PK-like) 375 669 IPR011009 -
Accr15g00138 722 FunFam Wall-associated receptor kinase 2 472 688 - -
Accr15g00138 722 Gene3D Transferase(Phosphotransferase) domain 1 472 686 - -
Accr15g00138 722 ProSiteProfiles EGF-like domain profile. 275 314 IPR000742 -
Accr15g00138 722 Pfam Protein tyrosine and serine/threonine kinase 398 665 IPR001245 GO:0004672|GO:0006468
Accr15g00138 722 ProSitePatterns Calcium-binding EGF-like domain signature. 275 300 IPR018097 GO:0005509
Accr15g00138 722 Gene3D Laminin 279 313 - -
Accr15g00138 722 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 6 669 IPR045274 GO:0007166
Accr15g00138 722 SUPERFAMILY EGF/Laminin 273 314 - -
Accr15g00138 722 Gene3D Phosphorylase Kinase; domain 1 366 471 - -
Accr15g00138 722 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 291 302 IPR000152 -
Accr15g00138 722 Gene3D Laminin 226 278 - -
Accr15g00138 722 Pfam Calcium-binding EGF domain 275 313 IPR001881 GO:0005509
Accr15g00138 722 SMART egfca_6 275 314 IPR001881 GO:0005509
Accr15g00138 722 Pfam Wall-associated receptor kinase galacturonan-binding 13 76 IPR025287 GO:0030247
Accr15g00138 722 CDD EGF_CA 275 305 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00138 4 722 Receptor kinase-like Gene Family AT1G21230 44.684 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr15g00138 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00138 - - pcin:129293718 880.552