Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00135 ATGGCAGCAGTAAGTGAAGCTCAATCTCTCGCAGGTTGTCCCGAAAAATGCGGAGATGTGGACATTCCATATCCATTTGGTGTAGGCCAACAACCTGGTACTTCTCGAAACTGTTTCTTGGATTATCAGTCATCATTCAACCTCACCTGTAACAACTCCACATCCAAGTTATACTTCTTCAACGTGCCAGTTTCCAACATATCCCTCCAACAAAGTCAAATGGAAATCTCCATTAATGTCTCCAAGAGTTGTTACAACCAATCACAACCATCTGTTCCTTACCAACTCAACGCCGGTGCTTTCACCATTTCTAGCAACCAAAACAAGTTCGTAACCATTGGTTGTGACGCGGTCGGCTTATTCGCTACAATGGACAACTCGAAGAGCAACTTCACTCCTTACAGTGGTTGCGTGGCCATATGTGACAAACGCCCTCCAAGAGAAATAATCATGACTGATGATAAGACTTGTTCTGGGACTGGTTGTTGTGAGGTGGATTTTCGAGCGGCAATTTATTACATTGAAATTGTAGCTGGTAGCCTCTTTAATCATACCGACGTGTCTAGTTTCAACAATTGTACATATGCTTTGGTTGTGAAACGGGACTGGTTTAGTTTCTCACTAGATTATCTGAGTAATTTTCCCTATGATCTGGTCCCTATCGTCCTAGAATGGACTGTTTCGAATGATTCTTGTCGAAATGCTTCTGGTAAAGAAGATTATGCCTGCAAATTCAACTCAGAATGTGTGGATTCTAGTAATGGAGTTGGCTACAATTGCAAATGCAAATCCGGCTTTGAGGGAAATCCATATCATCCAGATGGATGTCACGATATCGATGAGTGTGCCATACCCAATATCTGCCCTATGCCAAGGAGATGCTACAATCATCCTGGTTACCACAACTGTTCTTGTCCACCTGGATTCAATGACATTAATGGAACTGCCTGCATCACTCCTCAACGATCTAATCAACATAATTTGCTTATTCTGATTGCTTTAGGTGTGAGTGTCGCCTTGTTAGTTGTCATTACACTGGTCTTCACATTATGCTGGGCACACAAGCAGAGAACTTTGAAACAACTCAGACAAAAGAATTTCGAGCAAAATGGAGGAGACTTATTGCTACAACAACTTTCGCAACAGCAAGGCTACAGTACTACTCACACAAAAATATTTACAGAAGTTGAGCTTAAAAATGCCACAAACAACTTTGATGAAAGCCGAATCCTTGGTCAAGGAGGACAAGGCATAGTTTATAAAGGTATATTACGGGACAACACAGTTGTTGCCATCAAGAAGTCCAGAGTAGGAGGGGATCCAAAACAAATTAAGGATTTCATCAATGAAGTATTTGTGCTTTCTCAAATCAATCATCGTAATGTGGTCAAACTTTTGGGGTGTTGTCTTGAAACTGATGTTCCTTTGTTGGTATATGAGTTTGTGAATAATGGCACTCTTCTTTATCACATTGACCCTTTGAAGAATGAGATTTCTATTCCATGGGAGATTCGATTAAAGATAGCTGCAGAAACGGCTAATGCTATTTCATATTTACACTCTTATGCTTCCATCCCAATTATTCATCGGGATATTAAATCTACCAATATACTTTTAGACCATAATCTCATAGCAAAGGTGTCTGACTTTGGAGCTTCAAGACTTGTTCCTATCAATGAATCCCATGTTACCACTGTTGTACAGGGGACTTTAGGATACTTGGATCCAGAATATCTCCATGCAGGTCAGCTGAATGAGAAGAGTGACGTTTATAGCTTTGGAGTTGTGCTTATAGAGTTACTCACCGAAAGTAAAGCAGTTGAATTCAGTAGGGTGGAGGAGAAATATTTGGCAATGTATTTTGTATCTTCAATGAAAGAAGATCGTTTGTGGGAAATTATTGACAAACGAGTGTTAAACGAAAAGAATGAACATCAGCTTAAAGAAGTAGCCTTGTTGGCAAGGAGATGTGTAAGAGTAAAAGGTGAGGAAAGACCCACAATGAAGGAAGTAGCAATGGAGTTAGAAGGTATGATTTCATTGGAAAATTATCGTTCGGTGAAAGGGGAAGAAATTGTGTCAGAAGAAAGTGAGTACTTACTTGGTCATGTGCCACAGGCAAATGGTGCTAGTACTTCAGCTTCCTATGGTAGCATATTGAGGGAGATTGCATTTGAGATTGCAGATGGACGATGA 2196 0.4035 MAAVSEAQSLAGCPEKCGDVDIPYPFGVGQQPGTSRNCFLDYQSSFNLTCNNSTSKLYFFNVPVSNISLQQSQMEISINVSKSCYNQSQPSVPYQLNAGAFTISSNQNKFVTIGCDAVGLFATMDNSKSNFTPYSGCVAICDKRPPREIIMTDDKTCSGTGCCEVDFRAAIYYIEIVAGSLFNHTDVSSFNNCTYALVVKRDWFSFSLDYLSNFPYDLVPIVLEWTVSNDSCRNASGKEDYACKFNSECVDSSNGVGYNCKCKSGFEGNPYHPDGCHDIDECAIPNICPMPRRCYNHPGYHNCSCPPGFNDINGTACITPQRSNQHNLLILIALGVSVALLVVITLVFTLCWAHKQRTLKQLRQKNFEQNGGDLLLQQLSQQQGYSTTHTKIFTEVELKNATNNFDESRILGQGGQGIVYKGILRDNTVVAIKKSRVGGDPKQIKDFINEVFVLSQINHRNVVKLLGCCLETDVPLLVYEFVNNGTLLYHIDPLKNEISIPWEIRLKIAAETANAISYLHSYASIPIIHRDIKSTNILLDHNLIAKVSDFGASRLVPINESHVTTVVQGTLGYLDPEYLHAGQLNEKSDVYSFGVVLIELLTESKAVEFSRVEEKYLAMYFVSSMKEDRLWEIIDKRVLNEKNEHQLKEVALLARRCVRVKGEERPTMKEVAMELEGMISLENYRSVKGEEIVSEESEYLLGHVPQANGASTSASYGSILREIAFEIADGR 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00135 731 CDD EGF_CA 278 309 - -
Accr15g00135 731 Pfam Wall-associated receptor kinase galacturonan-binding 13 76 IPR025287 GO:0030247
Accr15g00135 731 FunFam Wall-associated receptor kinase 2 230 280 - -
Accr15g00135 731 SUPERFAMILY Protein kinase-like (PK-like) 385 679 IPR011009 -
Accr15g00135 731 SMART egfca_6 278 318 IPR001881 GO:0005509
Accr15g00135 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Accr15g00135 731 ProSiteProfiles Protein kinase domain profile. 405 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00135 731 Pfam Calcium-binding EGF domain 278 317 IPR001881 GO:0005509
Accr15g00135 731 Gene3D Phosphorylase Kinase; domain 1 376 481 - -
Accr15g00135 731 Gene3D Laminin 229 280 - -
Accr15g00135 731 Gene3D Transferase(Phosphotransferase) domain 1 482 697 - -
Accr15g00135 731 Gene3D Laminin 281 319 - -
Accr15g00135 731 FunFam Wall-associated receptor kinase 2 482 698 - -
Accr15g00135 731 SMART serkin_6 405 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00135 731 ProSiteProfiles EGF-like domain profile. 278 315 IPR000742 -
Accr15g00135 731 SUPERFAMILY EGF/Laminin 278 313 - -
Accr15g00135 731 FunFam Wall-associated receptor kinase 2 374 481 - -
Accr15g00135 731 CDD STKc_IRAK 411 678 - -
Accr15g00135 731 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 6 678 IPR045274 GO:0007166
Accr15g00135 731 Pfam Protein tyrosine and serine/threonine kinase 408 675 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00135 6 731 Receptor kinase-like Gene Family AT1G21230 45.760 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr15g00135 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00135 - - pcin:129293718 906.36