Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00117 ATGTTCCCCCCAAAGAAGGCTTCATCTATGAATTCTCAAGAGAGAGGCGTGTGTGTTCAACCTGACTCTGGCCTCGTCCTCACCACTGATCCTAAGCCTCGCCTTCGCTGGACCGTCGAACTCCATGAACGCTTTGTCGATGCCGTTGCCCAGCTCGGTGGCCCTGACAAGGCAACGCCGAAGACGATCATGAGGGTGATGGGTGTGAACGGTCTTACGCTTTACCACCTAAAGAGTCACCTTCAGAAATTTAGGCTTGGAAAGCAGCCCCACAAGGACTTCAACGATCATTCCATCAAGAATGGTATGAGAGGAGCTTCTGCTTTAGAACTTCAACGAAATTCTGCCTCCTCTTCCGCCATGATCGGTCGCAATATGAACGAGATGCAAATGGAGGTGCAGAGACGACTTCACGAACAACTAGAGGTTCAGAAACATCTTCAGCTGAGGATTGAAGCACAAGGGAAATACATGCAGAGCATATTAGAGAAGGCTTATCAAACACTTGCAGGTGAAAACTTGAAGAACAATATTAATGGATCTCATCATCTTCATCAAGCCAATATGACCCCTCCTCAAGATTTCACTTCTTCGTTCCCTCTCAACCCTAATTTCGCTTCTTTTCAAGATCAGCTTAACGTCTACGGCGGGGGCGATGACCAGCTCGATCATCATCTTCATCATCATCAGTTCATGCCAAATAGCAGCAACAACACAGAAAATCTCTGTGTGGGGATGAACAATAATAGTAATAAGAACAAGAGGCCTTTGTTTTGGAACAATGAAGATCTAAGGCTTCATCATCATGATGATCATCTGGGAACTGCTTCTTCTTCTTTGTGTCTTGATACTGATCCTTTTAAGGATGTTTCATTGGATAGAATCACAAGTAGTTCTGAGAATAACTACATTAATATTGATCCTATTTCAGACATGTATGACACTAAGCCTTTGCTTCATCATCAAGAGGACATTTTAGGGGATGCTAGTGCTACTGATAATAAGAAGCTTTTTGAAAGGCCTTCACCAAAAAGGGCACATTCCCTTCAACCAGCAGATCAAAGGATGAGTCCTATGATTAGCACCGGTACACCATTTTAG 1101 0.4405 MFPPKKASSMNSQERGVCVQPDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVNGLTLYHLKSHLQKFRLGKQPHKDFNDHSIKNGMRGASALELQRNSASSSAMIGRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENLKNNINGSHHLHQANMTPPQDFTSSFPLNPNFASFQDQLNVYGGGDDQLDHHLHHHQFMPNSSNNTENLCVGMNNNSNKNKRPLFWNNEDLRLHHHDDHLGTASSSLCLDTDPFKDVSLDRITSSSENNYINIDPISDMYDTKPLLHHQEDILGDASATDNKKLFERPSPKRAHSLQPADQRMSPMISTGTPF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00117 366 NCBIfam myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Accr15g00117 366 FunFam Myb family transcription factor 31 89 - -
Accr15g00117 366 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Accr15g00117 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Accr15g00117 366 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 241 IPR044848 GO:0003700
Accr15g00117 366 Pfam MYB-CC type transfactor, LHEQLE motif 129 168 IPR025756 -
Accr15g00117 366 MobiDBLite consensus disorder prediction 339 366 - -
Accr15g00117 366 Pfam Myb-like DNA-binding domain 35 83 IPR001005 -
Accr15g00117 366 Gene3D - 31 89 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00117 1 346 G2-like Transcription Factor Family AT1G79430 53.591 4.30e-109 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr15g00117 Myb_DNA-binding 4.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00117 - - pcin:129315830 394.045