Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00100 ATGAGATCGAAGAGTGGCAAGAGGAAGTGTGAAGATGTTGAGGTAACTGAAAGAAGAATCACTAGGGGCATTACTTCTGGAAAAAGCCCGTTATTAACAAACCAGAAAATCTCCATTTCCTCAGCTTCAACTGAAATTGATGACCATGACAAGTCCACAGAACGTCCTATTGGACCCGACGGTAACTATTATGAGTGTGAGATGTGTTATAAAGTGGGAAGACTCCTTTGTTGTGAAAGTTGCCCAAGAGCATATCACTTGAAATGCCTGGGACTTGAGGCTGTTCCAGAAGGACACTGGGAATGTCCCAGTTGTTGCGATGATTTTTCGAAGCCATTAAAATACCTTATGAGGGATTTTGATGCTTCCAAGGAAAACGACGAACCAGCTGCTCCAAAACTGAAATATTCTTCTGCTTCGTCAAAGAGGGATTAA 435 0.423 MRSKSGKRKCEDVEVTERRITRGITSGKSPLLTNQKISISSASTEIDDHDKSTERPIGPDGNYYECEMCYKVGRLLCCESCPRAYHLKCLGLEAVPEGHWECPSCCDDFSKPLKYLMRDFDASKENDEPAAPKLKYSSASSKRD 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00100 144 PANTHER PHD FINGER PROTEIN 12 47 106 IPR042163 GO:0003714|GO:0045892
Accr15g00100 144 MobiDBLite consensus disorder prediction 124 144 - -
Accr15g00100 144 SMART PHD_3 65 106 IPR001965 -
Accr15g00100 144 SUPERFAMILY FYVE/PHD zinc finger 52 106 IPR011011 -
Accr15g00100 144 ProSitePatterns Zinc finger PHD-type signature. 66 105 IPR019786 -
Accr15g00100 144 MobiDBLite consensus disorder prediction 39 61 - -
Accr15g00100 144 ProSiteProfiles Zinc finger PHD-type profile. 63 108 IPR019787 -
Accr15g00100 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 141 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00100 66 106 PHD Transcription Factor Family AT5G58610 53.659 1.63e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00100 - - qsa:O6P43_029386 96.2857