Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00073 ATGGCACTGACCTCCTACTTAAACTGGGAAAGTAATCTTCAAGCTGATCTGAACCTAGGAGCGAGCTTCTTCAATGAAGCAACACCAGAAGAAGAAGTACTTGTTGCACCAGATTATTATTATAACCATAATAATAACCACCACCTCTTCCTTCCTAATTGCTGTAACTCACTCGATCCAAACACGTCCTATCTCGATCCATATAGTAACTTGCTTTACCCTCATGAACTTGTTCCCTATGATCCCTTCATGTATGAGAATCATTATGACAGTCTGCTTCCTTGTCCAAAACGACAGAAGTGCTTGCCGTATGACCAGAATCTGACAATGATGGACTTGATTGCACCAACGAATAATAGTTTCTTCGGTGGGAATAATATTGTTGTGCCGAAGGTTCCAGAGTTTTATTATGATGAGGTTGCAATGCTGGGGAATGGAGAAAGTACTGTGGCAGCGGCGGTGGTGGAAGAAGAGAGGAAGAAGAATGAGAATACACTGCCGCCGCGGCCAGTGGTGTCAGCACAGAGCGTGGCGGCGAGGGAGAGGAGGAGGAAGATAACAGAGAAGACACAAGACCTGGGAAAGCTGGTTCCTGGTGGCTCAAAGATGAACACGGCTGACATGCTTCATGCTGCTGCTAAGTATGTGAATTACTTGCAGGCTCAGGTTGCCATGCTTCAACTCATGAACCCACTCAAGGAAGATAACAAGGTATTCGCTGCGACTGAAGAAATGCAGAAGCTGCTTACTTGTCCAGTTGTTGAAGAGAAGATGTACATGGAAGAGAAATGCTTTGTTCCAAAAGAGTTTGTCACCAACTTGACAAATCATAAAGACATTCAATCACTACCGTCCATCCTTAAAGATCTTAATCAGTTCATTTCAACAGACACAGATTGA 900 0.44 MALTSYLNWESNLQADLNLGASFFNEATPEEEVLVAPDYYYNHNNNHHLFLPNCCNSLDPNTSYLDPYSNLLYPHELVPYDPFMYENHYDSLLPCPKRQKCLPYDQNLTMMDLIAPTNNSFFGGNNIVVPKVPEFYYDEVAMLGNGESTVAAAVVEEERKKNENTLPPRPVVSAQSVAARERRRKITEKTQDLGKLVPGGSKMNTADMLHAAAKYVNYLQAQVAMLQLMNPLKEDNKVFAATEEMQKLLTCPVVEEKMYMEEKCFVPKEFVTNLTNHKDIQSLPSILKDLNQFISTDTD 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00073 299 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 173 266 IPR045843 GO:0003700|GO:0006355
Accr15g00073 299 Pfam Helix-loop-helix DNA-binding domain 178 220 IPR011598 GO:0046983
Accr15g00073 299 Gene3D - 173 233 IPR036638 GO:0046983
Accr15g00073 299 SMART finulus 176 225 IPR011598 GO:0046983
Accr15g00073 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Accr15g00073 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 172 228 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00073 60 295 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G34820 36.255 4.20e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr15g00073 HLH 2.3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00073 - - pcin:129313404 343.969