Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr15g00072 | ATGGCTTCTTCAACACAACCTGTTTCTACGGATGAGCCGGTTGTTACTGTGGATTGGCTTTATGCCAGCCTCAATGACCCTGACTTGAAGGTGCTGGATGCATCCTGGTACATGCCAGATGAGCAGAGGAACCCCATTCAAGAATATCAGGCTGCACATGTTCCTGGTGCGCGTTTCTTTGACATAGACAGAATAGCAGATCAAACTACAGATTTGCCGCATATGTTGCCATCAGAGGAAGCTTTTGCTGCTGCTGTGTCTGTTTTGAACATAGCAAACAAAGACAGAGTGGTTGTTTATGATGGCAAAGGAATATTTAGTGCACCTCGTGTCTGGTGGATGTTCCGAGTGTTTGGGCATGACCAAGTTTGGGTATTAGATGGTGGACTGCCAAAATGGCGTGCATTTGGACATGACGTCGAAACTAGTGCTTCTAGTGATAAATCCAGTGCCGCCACTGAAGCAGTAGAGAAAGTATATCAGGGACAGTCAGTTAGCCCAATCACATTTCAGACTAAATTTCAGCCACATCTTGTTTGGTCCCTGGAACAGGTAAAGAGAAACATTGAGGAGAAAAGCTACCAGCACATAGACGCACGATCAAAGCCTAGGTTTGATGGAGTAGCACCAGAACCCCGAGAGGGTATACAAAGTGGTCATATACCTGGAAGCAAGTGCATTCCTTTCTTCCAGTTGTTGGACGCTTCACAGACACTGTTACCGGCAGATGAAATTAAGAAGCGAATTGATCAAGAAGCTATCTCTTTGGATGGCCCCATCGTTACCTCATGTGGCACTGGCGTAACTGCTTGCATTCTTGTATTGGGCCTCCACCGTCTCGGAAAGTCTGACATTGCAGTCTATGATGGGTCTTGGACTGAATGGGCATTGCAATCTGATACGGCTAAAGAAACTTCATGA | 921 | 0.4615 | MASSTQPVSTDEPVVTVDWLYASLNDPDLKVLDASWYMPDEQRNPIQEYQAAHVPGARFFDIDRIADQTTDLPHMLPSEEAFAAAVSVLNIANKDRVVVYDGKGIFSAPRVWWMFRVFGHDQVWVLDGGLPKWRAFGHDVETSASSDKSSAATEAVEKVYQGQSVSPITFQTKFQPHLVWSLEQVKRNIEEKSYQHIDARSKPRFDGVAPEPREGIQSGHIPGSKCIPFFQLLDASQTLLPADEIKKRIDQEAISLDGPIVTSCGTGVTACILVLGLHRLGKSDIAVYDGSWTEWALQSDTAKETS | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr15g00072 | 306 | Gene3D | - | 11 | 159 | IPR036873 | - | |
| Accr15g00072 | 306 | ProSiteProfiles | Rhodanese domain profile. | 190 | 304 | IPR001763 | - | |
| Accr15g00072 | 306 | CDD | TST_Repeat_2 | 181 | 296 | - | - | |
| Accr15g00072 | 306 | FunFam | Sulfurtransferase | 7 | 149 | - | - | |
| Accr15g00072 | 306 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 12 | 144 | IPR036873 | - | |
| Accr15g00072 | 306 | ProSitePatterns | Rhodanese signature 1. | 49 | 60 | IPR001307 | GO:0004792 | |
| Accr15g00072 | 306 | ProSiteProfiles | Rhodanese domain profile. | 25 | 142 | IPR001763 | - | |
| Accr15g00072 | 306 | Gene3D | - | 175 | 305 | IPR036873 | - | |
| Accr15g00072 | 306 | FunFam | Sulfurtransferase | 175 | 306 | - | - | |
| Accr15g00072 | 306 | SMART | rhod_4 | 15 | 139 | IPR001763 | - | |
| Accr15g00072 | 306 | SMART | rhod_4 | 180 | 301 | IPR001763 | - | |
| Accr15g00072 | 306 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 175 | 297 | IPR036873 | - | |
| Accr15g00072 | 306 | PANTHER | THIOSULFATE SULFERTANSFERASE | 10 | 305 | IPR045078 | GO:0016783 | |
| Accr15g00072 | 306 | Pfam | Rhodanese-like domain | 16 | 134 | IPR001763 | - | |
| Accr15g00072 | 306 | Pfam | Rhodanese-like domain | 182 | 297 | IPR001763 | - | |
| Accr15g00072 | 306 | CDD | TST_Repeat_1 | 14 | 135 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr15g00072 | 4 | 305 | Sulfurtransferasese or Rhodanese | AT1G79230 | 74.426 | 4.14e-177 | 490 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr15g00072 | K01011 | - | tcc:18594871 | 502.671 |