Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00061 ATGCAGTACTTGAGCTTTGGCATCAATTCCCTCTCAGGGGAGCTTCCCAGGGAATTGGGAAATCTTACCGAGTTAACAAAATTAGGTCTTGGATCCAACAACTTTTCTGGTTCTATCCCGTCTGAATTAGGGAAACTCGTGAAATTGGAAGAAATTTACATAGATAGTTCGGGACTTAGTGGCCAGATTCCTCCTACTTTTGCTAATCTTAAAAACCTGGCGAAAGTATGGGCTTCAGACATTGAATTCACAGGCAGGATACCTGACTTCATAGGAAATTGGTCTAAGCTTGAGGACTTGAGGTTTCAGGGTAATTCTTTTGAAGGCCCAATACCATCATCATTGAGCAATCTGACTTCTCTTTCAGAATTGAGAATAAGTGAAATATCCAATGCGAGCTCCTCACTGGCATTTATAAGGAATATGAAGTCTTTGACTGTCTTAGTACTGAGAAATAACAATATTTCTGATTCAATTCCATCCAATATCGGTGAATTTCTAAGTTTGACCCAGCTGGATCTGAGCTTCAATGACATCATAGGACAGATTCCGGGATCACTTTTCAATCTGAGTTCACTAACACACTTGTTTCTTGGAAATAACAAACTCAGTGGTACAATCCCTACTCAGATAGGTCCAACTCTTCTCACTATAGACTTGTCCTACAACAATCTATCAGGGAGCCTCCCCTCTTGGGTAAACCAACAAAATTTACAACTAAATTTGGTTGCCAACAACCTGAAAATTGATGGTCCAAAGAGCAGTGGCCTTCCTTCTGGACTTGATTGTTTGCAGCAAAATTTTCCTTGTTTTCGTGGTACTGGAATATATTATAACTTTGCAATCAAGTGTGGCGGTCCTCCAATTACAACAGCAGAAAGAATTACTTATGACACAGATAATGAGACACTTGGTCCTGCAACTTATTTTGTTACTGATACAAGAAGATGGGCAGTTAGCAATGTTGGGTTATTTACTGGGTCAAACGATCCTCTATACAAAGGTTTTGTATCCAATCAGTTCACTGGTACTGTGGACCCAGAGCTCTTCCAGACAGCACGGCTATCGGCATCTTCATTAAGATATTATGGCTTGGGGCTGGAAAATGGGAATTACAACATTTCCCTCTTTTTTGCAGAAACATCTATTCTAGATACTACTACGTGGAAAAGTCTTGGCAGACGGGTCTTTGATATATATATCCAGCGGAATCGTGTTTGGAAGGACTTTAACATAAAAAGGGAAGTTGGGGGTGCCTCTTTTAGAGCTGTCCGAAGGGATTTTCAGGTTAGTGTGTCGGAAAACTTTCTTGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGTATTCCAGCTCAAGGTACTTATGGTCCTCTGATTTCAGCAATCAGCGCTACCCCAGATTTCATTCCCAGAGTCAGTAACAAACTTCCAGGCAGTTCAAAGAACAGAACCGGTTTGACTGTGGGAATTGTTGTTGGTGTTGGAGTTGTAAGCTTTCTATCTGTTTTTGTGGTGTTCTATATCATCCAGAGAAGAAAGCGTCATGGAGATGGTGAAGAAGAGATTTTAGATATTGATACAAAGACATACACTTTCAGCTACTCTGAGTTAAAGAATGCTACAGGTGACTTCAATCCTGACAACAAACTAGGGGAGGGAGGTTTCGGACCTGTTTATAAGGGAACACTAAATGATGGAAGAGTAGTTGTTGTGAAACAATTATCTGTAGGATCTCATCAAGGAAAGAGCCAGTTCATAGCTGAGATTGCAACAATATCTGCTGTGCAACATCGCAATCTTGTTAAATTATATGGATGTTGCCTTGAAGGAAATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAGGAGTCTTGATCAAGCATTATTTGGAAATCGTTTAGCTCTCAGCTGGCCCACACGCTATGATATCTGCATGGGAGTGGCTAGAGGTTTAGCTTATCTTCATGAAGAGTCTCGGCTGCGTATTGTGCACCGTGATGTAAAGGCTAGTAATATTCTGCTTGATCATGAGCTTACCCCTAAAATATCTGATTTTGGTTTGGCCAAGTTATATGATGATAAAAAGACTCATTTAAGTACCCGTGTGGCCGGGACAATTGGATACCTTGCTCCGGAGTATGCCATGCGTGGGCACCTTACAGAGAAAGCCGATGTGTTTTCCTTTGGTATTTCGGCCCTAGAGATTGTTAGTGGGAGGCCAACTTCTGATTCAAACTTGGAAGGAGAGAAGATGTATCTTCTAGAATGGGCTTGGCAGTTGCATGAAAAGAACAGTATAGTTGAACTGGCAGATCCTAGACTGTCATCGGATTTCAATGAGGAAGAATTTAAGAGAATTGTGGGGATTGCTCTTCTCTGCACTCAAACTTCACCATTGTCAAGGCCAGCAATGTCCCGTGTCGTGGCGATGCTTTCTGGAGATGTGGAAGTGAGCACTGTAACTTCAAGGCCTGGTTACTTGACAGACACAGACTGGAAGTTTGATGATGAGTACACCTTCATGACTGGCTTGGCTACAAAGGGATCAGATATGACTCTATATAACTCATCTGCAACTGCAAGCCCATCACCTGTAGATGCTTCAAAACCCATCCTTCCTCGCATTTTTGGTGAAGGTAGCTAA 2652 0.4163 MQYLSFGINSLSGELPRELGNLTELTKLGLGSNNFSGSIPSELGKLVKLEEIYIDSSGLSGQIPPTFANLKNLAKVWASDIEFTGRIPDFIGNWSKLEDLRFQGNSFEGPIPSSLSNLTSLSELRISEISNASSSLAFIRNMKSLTVLVLRNNNISDSIPSNIGEFLSLTQLDLSFNDIIGQIPGSLFNLSSLTHLFLGNNKLSGTIPTQIGPTLLTIDLSYNNLSGSLPSWVNQQNLQLNLVANNLKIDGPKSSGLPSGLDCLQQNFPCFRGTGIYYNFAIKCGGPPITTAERITYDTDNETLGPATYFVTDTRRWAVSNVGLFTGSNDPLYKGFVSNQFTGTVDPELFQTARLSASSLRYYGLGLENGNYNISLFFAETSILDTTTWKSLGRRVFDIYIQRNRVWKDFNIKREVGGASFRAVRRDFQVSVSENFLEIHLFWAGKGTCCIPAQGTYGPLISAISATPDFIPRVSNKLPGSSKNRTGLTVGIVVGVGVVSFLSVFVVFYIIQRRKRHGDGEEEILDIDTKTYTFSYSELKNATGDFNPDNKLGEGGFGPVYKGTLNDGRVVVVKQLSVGSHQGKSQFIAEIATISAVQHRNLVKLYGCCLEGNKRLLVYEYLENRSLDQALFGNRLALSWPTRYDICMGVARGLAYLHEESRLRIVHRDVKASNILLDHELTPKISDFGLAKLYDDKKTHLSTRVAGTIGYLAPEYAMRGHLTEKADVFSFGISALEIVSGRPTSDSNLEGEKMYLLEWAWQLHEKNSIVELADPRLSSDFNEEEFKRIVGIALLCTQTSPLSRPAMSRVVAMLSGDVEVSTVTSRPGYLTDTDWKFDDEYTFMTGLATKGSDMTLYNSSATASPSPVDASKPILPRIFGEGS 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00061 883 FunFam Leucine-rich repeat receptor-like protein kinase 277 468 - -
Accr15g00061 883 FunFam Putative LRR receptor-like serine/threonine-protein kinase 622 826 - -
Accr15g00061 883 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 40 132 - -
Accr15g00061 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
Accr15g00061 883 SMART LRR_typ_2 142 166 IPR003591 -
Accr15g00061 883 SMART LRR_typ_2 22 46 IPR003591 -
Accr15g00061 883 SMART LRR_typ_2 190 214 IPR003591 -
Accr15g00061 883 Gene3D Ribonuclease Inhibitor 133 256 IPR032675 -
Accr15g00061 883 FunFam Putative LRR receptor-like serine/threonine-protein kinase 133 255 - -
Accr15g00061 883 SUPERFAMILY Protein kinase-like (PK-like) 529 828 IPR011009 -
Accr15g00061 883 Gene3D - 278 468 - -
Accr15g00061 883 SUPERFAMILY L domain-like 2 249 - -
Accr15g00061 883 SMART serkin_6 546 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00061 883 Pfam Malectin domain 279 464 IPR021720 -
Accr15g00061 883 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 846 - -
Accr15g00061 883 ProSiteProfiles Protein kinase domain profile. 546 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00061 883 CDD STKc_IRAK 552 814 - -
Accr15g00061 883 Pfam Protein tyrosine and serine/threonine kinase 549 814 IPR001245 GO:0004672|GO:0006468
Accr15g00061 883 Gene3D Ribonuclease Inhibitor 1 132 IPR032675 -
Accr15g00061 883 FunFam Leucine-rich repeat receptor-like protein kinase 516 621 - -
Accr15g00061 883 Gene3D Phosphorylase Kinase; domain 1 508 621 - -
Accr15g00061 883 Gene3D Transferase(Phosphotransferase) domain 1 622 825 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00061 1 881 Receptor kinase-like Gene Family AT1G56120 62.132 0.0 1104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr15g00061 PK_Tyr_Ser-Thr 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00061 - - qsa:O6P43_001204 1300.8