Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00058 ATGTCTCGTGTCGTGGCGATGCTTTCTGGAGATATGGAAGTGAGCACTGTAACTTCAAGGCCTGGTTACTTGACAGACTGGAAGTTTGATGATAAGTACACCTTCATGACTAGCTTGGCTACAAAGGGATCAGATATGACCCAATATAACTCATCTGCAACTGCAAGCCAATCACCTGTAGATGCTTCTGAAGCCATCCTTCCTCACATTGTTGGTGAAGAGCTTTTAGGTATTGATCCAACGACGTACATTTTCAGTTACTTTGGGTTAAAAAATGCTACAGGTGACTTCATTCCTGACAACAAACTGGGGGAGGGAGGTTTTAGACCTGTTTATAAGGGAACACTTAGTGATGGAAGAGTAGTTGCTGTGAAACAATTATCTGTAGAATCTCATCAAGGAAAGAGCCAGTTCATAATAGAGATTGCAACAATATCTGCTGCGCAACATCGCAATCTTGTTAAATTATACGGATGTTGCCTTGAAGGAGAAATAAAAGACTTCTTGTCTATGAGTATCTAG 522 0.41 MSRVVAMLSGDMEVSTVTSRPGYLTDWKFDDKYTFMTSLATKGSDMTQYNSSATASQSPVDASEAILPHIVGEELLGIDPTTYIFSYFGLKNATGDFIPDNKLGEGGFRPVYKGTLSDGRVVAVKQLSVESHQGKSQFIIEIATISAAQHRNLVKLYGCCLEGEIKDFLSMSI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00058 173 SUPERFAMILY Protein kinase-like (PK-like) 77 164 IPR011009 -
Accr15g00058 173 Gene3D Phosphorylase Kinase; domain 1 77 169 - -
Accr15g00058 173 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 81 164 - -
Accr15g00058 173 ProSiteProfiles Protein kinase domain profile. 97 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00058 173 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 73 170 - -
Accr15g00058 173 Pfam Protein tyrosine and serine/threonine kinase 101 163 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00058 1 31 Receptor kinase-like Gene Family AT1G56120 77.419 7.81e-09 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr15g00058 PK_Tyr_Ser-Thr 5.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00058 - - vvi:100262365 154.836