Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00056 ATGTCGTCGTCTTCACCAGTCATGGCTTTTGCAATTGCTTTTGCTGTTTGTGTGTTCTTCAGCTCCCTGGTTTCTGTATCACAAGCTCAAAACGCTACAACAGATCCTTCTGAAGCGAGAGTTTTGAATTCAATCTTCAACAAATGGGGAAAATCGGTCCGGGATAGGGGGGAAGATATATGGAATATAAGCGGGGAACCTTGTAGCGGACGAGCCATTGACAGCACTACCAAGATCGAGGACTTTAACCCATTTATCAAATGCGAGTGTTCCAATGGCACTTGCCACGTTACTGCACTGAGGGTTTATGCAAGTGATGTTGTTGGGGAAATCCCAGAAGAGCTATGGACCCTAACTCACCTTACCAATTTGAACCTCGCCCAGAATTACTTGACGGGTTCTCTACCTCCAGCAATAGGAAATCTAACTCGTATGGAATACTTGACCTTTGGCATTAATTCCCTCTCAGGGGAGCTTCCAAGGGAATTGGGAAATCTTACAGAGTTAAAAGTATTGGGTCTTGGATCCAACAACTTTTCTGGTTCTATCGTGTTTGAAATAGGGAAACTCGTGAATTTGGAAGAAATCTACATAGATAGTTCGGGACTTAGTGGCCAGATTCCTCCCACTTTTGCTAATCTTAAAAACCTGGCGAAAGTATGGGCTTCAGACATGGAACTCACGGGCAGGATACCTGACTTCATAGGAAATTGGTCTAAGCTTAAGGACTTGAGGTTTCAGGGTAATTCTTTTGAAGGCCCAATACCATCATCATTGAGCAATCTGACTTCTCTTTCAGAATTGAGAATAAGTGAAATATCTAATGCGAGCTCCTCACTGGCATTTATAAGGAATATGAAGTCTTTGACTGTCTTAGTACTGAGAAATAACAATATTTCTGATTCCATTCCATCCAATATCGGTGAATTTCTAAGTTTGACCCAGCTGGATCTGAGCTTCAATAACATCACAGGACAGATTCCGGAATCACTTTTCAATCTGAGTTCACTAACACACTTATTTCTTGGAAATAACAAACTCAGTGGTACAATCCCTATTCAGATAAGGCCAACTCTTCTCACTATAGACTTGTCCTACAACAATCTGTCAGGGAGCCTCCCCTCTTGGGTAAACCAACAAAATTTACAACTAAATTTGGTTGCCAACAACCTGACAATAGATGGTTCAAGTAGCAGTGGCCTTCCTTCTGGACTCAATTGTTTGCAGCAAAATTTTCCTTGTTTTCGTGGTGATGGAATATATTATAACTTTTCAATCAAGTGTGGCGGTCCTCGAATTACAACAGCAGAAAGAATTACTTATGACACAGATAATGAGACACTTGGTCCTGCAACTTATTTTGTTACCAATACAAGAAGATGGGCAGTTAGCAATGTTGGGTTATTTACTGGGTCAAGCAATAGTCTATACAAAAGTTTTGTATCCAATCAGTTCACTGGTACTGTGGACCCAGAGCTCTTCCAAACAGCAAGGCTATCGGCATCGTCATTAAGATATTATGGCCTGGGGCTGGAAAACGGGAATTACAACATTTCCCTCTTCTTCGCAGAGACATCTATTCAAGATGATACTACTACGTGGAAAAGTCTTGGCAGACGGGTCTTTGATATATATATCCAGGGGAATCGTGTTTTGAAGGACTTTGACATAAAAACGGAAGCTGGGGGTGCCTCTTTTAGAGCTGTCAAAAGGGATTTTCAGGTTCATGTATCAGAAAACCTCCTTGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGTATTCCATTGCAAGGTACTTATGGTCCTCTGATTTCAGCGATCAGTGCTACCCCAGATTTCATTCCCAGAGTCAGTAACAAACTTCCAGGCAGTTCAAAGAACAGAACCAGTCTGATTGTAGGAGTTGTTGTTGGTGTTGGAGTTGTAAGCTTTCTGTCTGTTCTTGTGGTTTTCTGTATCATCCAGAGAAGAAAGCGTCATGGAGATGGTGAAGAAGAGCTTTTAGATATTGATACAAAGACGTACACTTTCAGCTACTCTGAGTTAAAGAATGCTACAGGTGACTTCAATCCTGACAACAAACTGGGGGAGGGAGGTTTCGGACCTGTTTATAAGGGAACACTTAATGATGGAAGAGTAGTTGCTGTGAAACAATTATCTGTAGGATCTCATCAAGGAAAGAGCCAGTTCATAGCTGAGATTGCAATAATATCTGCTGTGCAACATCGCAATCTTGTTAAATTATACGGATGTTGCCTTGAAGGAAATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAACCATTATTTGGGAATCGCTTAGCTCTCAACTGGCCCACACGCTATGATATCTGCATGGGTGTGGCTAGAGGTTTAGCTTATCTGCATGAAGAGTCTCGGCTCCGTATCGTGCACCGTGATGTAAAGGCCAGTAATATTCTGCTTGATCATGAGCTTACCCCTAAAATATCTGATTTTGGTTTGGCCAAGTTATACGATGATAAAAAAACCCATTTAAGCACCCGTGTGGCCGGGACAATTGGATATCTTGCTCCGGAGTATGCCATGCGTGGGCACCTTACAGAGAAAGCAGATGTGTTTTCCTTTGGTGTTTTGGCCCTAGAGATTGTTAGTGGGAGGCCAAATTCTGATTCAAACTTGGAAGGAGAGAAGATCTATCTTCTAGAATGGGCTTGGCAGTTGCATGAACAGAACAGTATAGTTGGACTGGCAGATCCTAGACTGTCATCAGATTTCAATGAGGAAGAATTCAAGAGAATTGTGGGGATAGCTCTTCTCTGCACGCAAACTTCACCATTGTCAAGGCCAGCAATGTCCCGTGTTGTGGCGATGCTTTCTGGAGATATGGAAGTGAGCACTGTAACTTCAAGGCCTGGTTACTTGACAGACTGGAAGTTTGATGATGAGTACACCTTCATGACTGGCTTGGCTACAAAGGGATCAGATATGACTCCATATAACTCATCTGCAACTGCAAGCCAATCACCTATAGATGCTTCTAAACCCATCCTTCCTCACATTGTTGGTGAAGGTAGCTAA 3081 0.4226 MSSSSPVMAFAIAFAVCVFFSSLVSVSQAQNATTDPSEARVLNSIFNKWGKSVRDRGEDIWNISGEPCSGRAIDSTTKIEDFNPFIKCECSNGTCHVTALRVYASDVVGEIPEELWTLTHLTNLNLAQNYLTGSLPPAIGNLTRMEYLTFGINSLSGELPRELGNLTELKVLGLGSNNFSGSIVFEIGKLVNLEEIYIDSSGLSGQIPPTFANLKNLAKVWASDMELTGRIPDFIGNWSKLKDLRFQGNSFEGPIPSSLSNLTSLSELRISEISNASSSLAFIRNMKSLTVLVLRNNNISDSIPSNIGEFLSLTQLDLSFNNITGQIPESLFNLSSLTHLFLGNNKLSGTIPIQIRPTLLTIDLSYNNLSGSLPSWVNQQNLQLNLVANNLTIDGSSSSGLPSGLNCLQQNFPCFRGDGIYYNFSIKCGGPRITTAERITYDTDNETLGPATYFVTNTRRWAVSNVGLFTGSSNSLYKSFVSNQFTGTVDPELFQTARLSASSLRYYGLGLENGNYNISLFFAETSIQDDTTTWKSLGRRVFDIYIQGNRVLKDFDIKTEAGGASFRAVKRDFQVHVSENLLEIHLFWAGKGTCCIPLQGTYGPLISAISATPDFIPRVSNKLPGSSKNRTSLIVGVVVGVGVVSFLSVLVVFCIIQRRKRHGDGEEELLDIDTKTYTFSYSELKNATGDFNPDNKLGEGGFGPVYKGTLNDGRVVAVKQLSVGSHQGKSQFIAEIAIISAVQHRNLVKLYGCCLEGNKRLLVYEYLENKSLDQPLFGNRLALNWPTRYDICMGVARGLAYLHEESRLRIVHRDVKASNILLDHELTPKISDFGLAKLYDDKKTHLSTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVLALEIVSGRPNSDSNLEGEKIYLLEWAWQLHEQNSIVGLADPRLSSDFNEEEFKRIVGIALLCTQTSPLSRPAMSRVVAMLSGDMEVSTVTSRPGYLTDWKFDDEYTFMTGLATKGSDMTPYNSSATASQSPIDASKPILPHIVGEGS 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00056 1026 FunFam Putative LRR receptor-like serine/threonine-protein kinase 276 399 - -
Accr15g00056 1026 ProSiteProfiles Protein kinase domain profile. 691 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00056 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Accr15g00056 1026 FunFam Putative LRR receptor-like serine/threonine-protein kinase 767 971 - -
Accr15g00056 1026 SUPERFAMILY L domain-like 86 395 - -
Accr15g00056 1026 ProSiteProfiles Leucine-rich repeat profile. 312 334 IPR001611 GO:0005515
Accr15g00056 1026 CDD STKc_IRAK 697 959 - -
Accr15g00056 1026 Gene3D - 422 613 - -
Accr15g00056 1026 SMART serkin_6 691 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00056 1026 SUPERFAMILY Protein kinase-like (PK-like) 674 975 IPR011009 -
Accr15g00056 1026 FunFam Os05g0263100 protein 39 275 - -
Accr15g00056 1026 Gene3D Phosphorylase Kinase; domain 1 653 766 - -
Accr15g00056 1026 Pfam Protein tyrosine and serine/threonine kinase 694 958 IPR001245 GO:0004672|GO:0006468
Accr15g00056 1026 MobiDBLite consensus disorder prediction 997 1026 - -
Accr15g00056 1026 Gene3D Ribonuclease Inhibitor 36 276 IPR032675 -
Accr15g00056 1026 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 990 - -
Accr15g00056 1026 FunFam Leucine-rich repeat receptor-like protein kinase 661 766 - -
Accr15g00056 1026 FunFam Leucine-rich repeat receptor-like protein kinase 421 613 - -
Accr15g00056 1026 Gene3D Transferase(Phosphotransferase) domain 1 767 971 - -
Accr15g00056 1026 Pfam Malectin domain 423 609 IPR021720 -
Accr15g00056 1026 SMART LRR_typ_2 118 142 IPR003591 -
Accr15g00056 1026 SMART LRR_typ_2 286 310 IPR003591 -
Accr15g00056 1026 SMART LRR_typ_2 334 357 IPR003591 -
Accr15g00056 1026 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Accr15g00056 1026 Gene3D Ribonuclease Inhibitor 277 399 IPR032675 -
Accr15g00056 1026 MobiDBLite consensus disorder prediction 997 1012 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00056 145 1024 Receptor kinase-like Gene Family AT1G56120 62.656 0.0 1116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr15g00056 PK_Tyr_Ser-Thr 8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00056 - - qsa:O6P43_001204 1446.41