Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00054 ATGTCGTCGTCTTCACCAGCCATGGCTTTTGCAATTGCTTTTTCTGTTTGTGTGTTCTTCAGCTGCCTGGTTTCTGTATCACAAGCTCAAAACGCTACAACAAATCCTTCTGAAGCGAGAGTTTTGAATTCAATCTTCAACAAATGGGGAATATCGGCACTAGCAAACATATGGAATATAAGCGGGGAACCTTGTAGCGGACGAGCCATTGACAGCACTACCAAGATCGAAGACTTTAATCCATTTATCAAATGCGAGTGTTCCAATGGCACTTGCCACGTTACTGAACTGAGGGTTTATGCATTGGATGTTGTCGGGGAAATCCCAGAAGAGCTATGGACTCTGACTCGCCTTACCAATTTGAAACTCGACCAGAATTACTTGACGGGTTCTCTACCTCCAGCAATAGGAAATCTAACTCGTATGCAGTACATGGCCTTAGCCATCAATTCCTTCTCAGGGGAGCTTCCCAGGGATTTGGGAAATCTTACCGAGTTAAAAGTATTGGGTCTTGGATCCAACAACTTTTCTGGTTCTATCCCATCTGAATTAGGGAAACTCGTGAAATTGGAACAACTCTACTTAGATAGTTCGGGACTTAGTGGCCAGATTCCTCCCACTTTTGCCAATCTTAAAAACCTGGCGTCAGTATGGGCTTCAGACATGGAACTCACGGGTAGGATACCTGACTTCATAGGAAATTGGTCAAAGCTTAAGGAGTTGAGGTTTCAGGGTAATTCTTTTGAAGGCCCAATACCATCATCATTGAGCAATCTGACTTCTCTTTCAGATTTGAGAATAAGTGAAATATCCAATGCGAGCTCCTCACTGGCATTTATAAGGAACATGAAGTCTTTGACTATCTTAGTACTAAGAAATAACAATATTTCTGATTCAATTCCATCCAATATCGGTGAATTTCTAAATTTGACCCAGCTGGATCTGAGCTTCAATAACATCACAGGACAGATTCCGGGATCTCTTTTCAATCTGAGTTCCCTTGCATACTTGTTTCTTGGAAATAACAGACTCAATGGTACAATCCCTACTCAGAGAAGCCCAACTCTTCTCACTATAGATTTGTCCTACAACAATCTATCAGGGAGCCTCCCCTCTTGGGTAAACCAACAAAATTTACAAGTAAATTTGGTTGCCAACAACCTGGCAATAGATGGTTCAAATAGCAGTGGCCTTCCTTCTGGACTTGATTGTTTGCAGCAAAATTTTCCTTGTTTTCGTGGTGCTGGAATATATTATAACTTTGCAATCAAATGTGGCGGTCCTCCAATTACAACAGCAGATAGAATTACTTACGACACAGATAATGAGACACTTGGTCCTGCAACTTATTTTGTTACTGATACAAGAAGATGGGCAGTTAGCAATGTTGGGTTATTTACTGGGTCAAGTGATCCTCTATACAAAAGTTTTGTATCCAATCAGTTCACTGGTACTGTGGACTCAGAGCTCTTCCAGACAGCACGGCTATCGGCATCTTCGTTAAGATATTATGGTCTGGGGCTGGAAAATGGGAATTATAACATTTCCCTCTTTTTCGCAGAAACATCTATTCTAGATACTACTACTACATGGAAAAGTCTGGGCAGACGGGTCTTTGATATATATATCCAGGGGAATCGTGTTTGGAAGGATTTTGACATAAAAAGGGAAGCTGGGGGTGCCTCTTTTAGAGCTGTCAAAAGGGATTTTCAGGTTCATGTATCAGAAAACTTCCTTGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGTATTCCATTGCAAGGTACTTATGGTCCTCTGATTTCAGCGATCAGTGCTACCCCAGATTTCATTCCCAGAGTCAGTAACAAACTTCCAGGCAGTTCAAAGAACAGAACCAGTCTGATTGTAGGAGTTGTTGTTGGTGTTGGAGTTGTAAGCTTTCTGTCTATTCTTGTGGTTTTCTGTATCGTCCAGAGAAGAAAGCGTCATGGAGATGGTGAAGAAGAGCTTTTAGGTATTGATATAAAGACATACACTTTCAGCTATTCTGAGTTAAAGAATGCTACAGGTGACTTCAATCCTGACCACAAACTGGGGGAGGGAGGTTTCGGACCTGTTTATAAGGGAACACTTAATGATGGAAGAGTAGTTGCTGTGAAACAATTATCTGTAGCATCTCATCAAGGAAAGAGCCAGTTTATAGCTGAGATTGCAACAATATCTGCTGTGCAACATCGCAATCTTGTTAAATTATACGGGTGTTGCCTTGAAGGAAATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGAAAATTGTTTAGCTCTCAACTGGCCCACACGCTGTGATATCTGCATGGGTGTGGCTAAAGGTTTAGCTTATCTTCATGAAGAGTCTCGACTCCGTATTGTGCACCGTGATGTAAAGGCTAGCAATGTTCTACTTGATTATGAGCTTACCCCTAAAATATCTGATTTTGGTTTGGCCAAGTTATATGATGATAAAAAGACCCATATAAGCACCCGTGTGGCTGGGACAATTGGATATCTTGCCCCGGAGTATGCCATGCGTGGGCACCTTACAGAGAAAGCAGATGTATTTTCCTTTGGCGTTTTGGCCTTAGAGATAGTTAGTGGGAGGCCAAATTCTGATTCAAGCCTGGAAGGAGAGAAGATGTATCTTCTAGAATGGGCTTGGCAACTGCATGAAAACGACTCTATACTTGAACTGGTAGATCCTAGACTATCAAAAGGTTTCAACGAGGAAGAAGTAAAAAGGATTGTAGGGATATCTCTTCTGTGCACTCAATCATCACCATCGTTAAGGCCAGCAATGTCCCGTGTGGTGGCGATGCTTTCTGGAGATATCGAAGTGAGCAGTGTTACTTCAAAGCCTGGATACTTGACAGATTGGAAATTTGATGATGTGAGCAGCTTCATGACTGGCTTGGCCACAAGGGGATCAGAGACAAGTCAATATAACTCATCCACAAGTACCAGCACTGTTAGTGTTGCAAACCATTCACCTGGAGGTGCTTCTAAACCAATCCTTCGTAATATTATTAGTGAAGGTAGGTGA 3090 0.4181 MSSSSPAMAFAIAFSVCVFFSCLVSVSQAQNATTNPSEARVLNSIFNKWGISALANIWNISGEPCSGRAIDSTTKIEDFNPFIKCECSNGTCHVTELRVYALDVVGEIPEELWTLTRLTNLKLDQNYLTGSLPPAIGNLTRMQYMALAINSFSGELPRDLGNLTELKVLGLGSNNFSGSIPSELGKLVKLEQLYLDSSGLSGQIPPTFANLKNLASVWASDMELTGRIPDFIGNWSKLKELRFQGNSFEGPIPSSLSNLTSLSDLRISEISNASSSLAFIRNMKSLTILVLRNNNISDSIPSNIGEFLNLTQLDLSFNNITGQIPGSLFNLSSLAYLFLGNNRLNGTIPTQRSPTLLTIDLSYNNLSGSLPSWVNQQNLQVNLVANNLAIDGSNSSGLPSGLDCLQQNFPCFRGAGIYYNFAIKCGGPPITTADRITYDTDNETLGPATYFVTDTRRWAVSNVGLFTGSSDPLYKSFVSNQFTGTVDSELFQTARLSASSLRYYGLGLENGNYNISLFFAETSILDTTTTWKSLGRRVFDIYIQGNRVWKDFDIKREAGGASFRAVKRDFQVHVSENFLEIHLFWAGKGTCCIPLQGTYGPLISAISATPDFIPRVSNKLPGSSKNRTSLIVGVVVGVGVVSFLSILVVFCIVQRRKRHGDGEEELLGIDIKTYTFSYSELKNATGDFNPDHKLGEGGFGPVYKGTLNDGRVVAVKQLSVASHQGKSQFIAEIATISAVQHRNLVKLYGCCLEGNKRLLVYEYLENKSLDQALFENCLALNWPTRCDICMGVAKGLAYLHEESRLRIVHRDVKASNVLLDYELTPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVLALEIVSGRPNSDSSLEGEKMYLLEWAWQLHENDSILELVDPRLSKGFNEEEVKRIVGISLLCTQSSPSLRPAMSRVVAMLSGDIEVSSVTSKPGYLTDWKFDDVSSFMTGLATRGSETSQYNSSTSTSTVSVANHSPGGASKPILRNIISEGR 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00054 1029 SMART serkin_6 688 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr15g00054 1029 SUPERFAMILY L domain-like 83 392 - -
Accr15g00054 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Accr15g00054 1029 MobiDBLite consensus disorder prediction 992 1012 - -
Accr15g00054 1029 FunFam Leucine-rich repeat receptor-like protein kinase 658 763 - -
Accr15g00054 1029 FunFam Os05g0263100 protein 39 272 - -
Accr15g00054 1029 CDD STKc_IRAK 694 956 - -
Accr15g00054 1029 SMART LRR_typ_2 309 331 IPR003591 -
Accr15g00054 1029 SMART LRR_typ_2 115 139 IPR003591 -
Accr15g00054 1029 SMART LRR_typ_2 283 307 IPR003591 -
Accr15g00054 1029 SMART LRR_typ_2 163 187 IPR003591 -
Accr15g00054 1029 Gene3D Phosphorylase Kinase; domain 1 663 763 - -
Accr15g00054 1029 FunFam Leucine-rich repeat receptor-like protein kinase 418 610 - -
Accr15g00054 1029 Gene3D - 419 610 - -
Accr15g00054 1029 MobiDBLite consensus disorder prediction 992 1019 - -
Accr15g00054 1029 Pfam Malectin domain 420 606 IPR021720 -
Accr15g00054 1029 ProSiteProfiles Leucine-rich repeat profile. 309 331 IPR001611 GO:0005515
Accr15g00054 1029 Gene3D Ribonuclease Inhibitor 273 396 IPR032675 -
Accr15g00054 1029 SUPERFAMILY Protein kinase-like (PK-like) 671 977 IPR011009 -
Accr15g00054 1029 Gene3D Ribonuclease Inhibitor 34 272 IPR032675 -
Accr15g00054 1029 FunFam Putative LRR receptor-like serine/threonine-protein kinase 764 968 - -
Accr15g00054 1029 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Accr15g00054 1029 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 990 - -
Accr15g00054 1029 FunFam Putative LRR receptor-like serine/threonine-protein kinase 273 396 - -
Accr15g00054 1029 Pfam Protein tyrosine and serine/threonine kinase 691 956 IPR001245 GO:0004672|GO:0006468
Accr15g00054 1029 Gene3D Transferase(Phosphotransferase) domain 1 764 968 - -
Accr15g00054 1029 ProSiteProfiles Protein kinase domain profile. 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00054 99 272 Receptor kinase-like Gene Family AT1G56120 28.736 2.45e-12 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr15g00054 PK_Tyr_Ser-Thr 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00054 - - lang:109352863 1508.43