Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00046 ATGAAGGAAGGTGGTAGAAAACCGGGTGCACTGCCGCCATGTGCAGCGTGCAAGCTTATCCGGCGAAGATGTGCTCCGGATTGCCTCTTTGCTCCTTACTTTCCGGCCGATCAACCCCACAAATTTGCAAGCGTTCACAAGGTTTTTGGTGCTAGCAATGTCAATAAAATGTTGCAGGAACTACCAGAGGAGCAAAGGAGTGACGCAGTGAGTTCAATGGTATATGAAGCAAATGCGAGGATGAGGGACCCAGTGTATGGATGTGTGGGGGCCATATCGTGTCTCCAGCAACAAGTTGCTGTGCTTCAAACACAACTTGCTCTTGCCCAGGCAGAGCTTGTTCACATAAGAAATTCTTCTTCATCAACCCAACCTCAATCCTCCTCTCATCATCATAATGATACCAAGTCGTCTTCTTTTTTCGCCATCGACAATGTCACCGAAAGCTTGTGGTCTTGCTAG 462 0.4805 MKEGGRKPGALPPCAACKLIRRRCAPDCLFAPYFPADQPHKFASVHKVFGASNVNKMLQELPEEQRSDAVSSMVYEANARMRDPVYGCVGAISCLQQQVAVLQTQLALAQAELVHIRNSSSSTQPQSSSHHHNDTKSSSFFAIDNVTESLWSC 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00046 153 Coils Coil 92 112 - -
Accr15g00046 153 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Accr15g00046 153 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 134 - -
Accr15g00046 153 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00046 1 153 AS2 family AT1G31320 61.047 7.82e-61 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr15g00046 LOB 1.5e-42 No_clan