Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr15g00043 ATGGATCATATAATGGAAGATTTGAGAAGCACTAAAGAAGAAGAGGAGTTTGAACTTCCAGGGTTTCGATTCCATCCAACAGATGAGGAACTCGTGAGATTCTACCTCAGAAGGAAGCTCGACAAGAAACCCATCAGTATCGAACTCATCAAGCAGATTGATATCTACAAATACGACCCTTGGGATCTTCCCAAAGCTAGTTGTACGGGGGCAGACAAGGAGTGGTACTTCTATTGCAGAAGGGGGAGGAAGTACAAGAACAGTATAAGGCCGAACAGAGTGACAGGATCAGGGTTTTGGAAGGCAACAGGAATAGACAAGCCTGTGTATTCTGTTGCAGGAGAAGGCGTTAGTGATTGTATTATTGGCCTCAAGAAAACACTTGTTTACTATCGTGGTAGTGCTGGTAAAGGCACCAAAACTGAGTGGATGATGCATGAGTTTCGCCTTCCCTCCAACACAAATCACCCTTCTCATAATCCCCAAGAAGCTGAAATTTGGACGCTCTGTAGAATTTTCAAAAGAACTGTTTCGCAAAGAAAATGCACACCAGATTGGGCACAAATGGCTGCAAAGCGTCGTTGCAGTGACAAGATGAGCAGATCAATGAGCAATAATAATAGTGCTGTGGATTCTTGTAATAGTAATATTACTTATGATCAAGAATCATATATCAACTTTGGATCGGGCAGCCCAGAGCAGAAGCCTCAGCTTGTTCCTAACTACAGTACCAGCAACAATAATCATCGTTATAATTATGATGATCATCAAAGAAATCATCATTTTGGCCGTACTTCAATGGCTGCACAACATCCTCAGCAGCAGCAGCCTCATCAATTAACTGCGTCGTCCTCTTCGCCATTGTCAGCTTTGAGTTTCCGGGGTAATAATAACCAGCAGGCTTCCAATAATGACCTGTTAGCGTTTGAGAACCCATGGGACGAGTTTGAATCAGTGGTGCAATTTTGCTCTTGA 975 0.4308 MDHIMEDLRSTKEEEEFELPGFRFHPTDEELVRFYLRRKLDKKPISIELIKQIDIYKYDPWDLPKASCTGADKEWYFYCRRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSVAGEGVSDCIIGLKKTLVYYRGSAGKGTKTEWMMHEFRLPSNTNHPSHNPQEAEIWTLCRIFKRTVSQRKCTPDWAQMAAKRRCSDKMSRSMSNNNSAVDSCNSNITYDQESYINFGSGSPEQKPQLVPNYSTSNNNHRYNYDDHQRNHHFGRTSMAAQHPQQQQPHQLTASSSSPLSALSFRGNNNQQASNNDLLAFENPWDEFESVVQFCS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr15g00043 324 MobiDBLite consensus disorder prediction 224 250 - -
Accr15g00043 324 FunFam NAC domain-containing protein 35 27 178 - -
Accr15g00043 324 ProSiteProfiles NAC domain profile. 18 175 IPR003441 GO:0003677|GO:0006355
Accr15g00043 324 SUPERFAMILY NAC domain 18 174 IPR036093 GO:0003677|GO:0006355
Accr15g00043 324 MobiDBLite consensus disorder prediction 224 299 - -
Accr15g00043 324 Gene3D NAC domain 27 179 IPR036093 GO:0003677|GO:0006355
Accr15g00043 324 MobiDBLite consensus disorder prediction 263 299 - -
Accr15g00043 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 275 - -
Accr15g00043 324 Pfam No apical meristem (NAM) protein 20 150 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr15g00043 1 187 NAC Transcription Factor Family AT5G39820 52.607 1.32e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr15g00043 NAM 3.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr15g00043 - - gmx:100790471 340.502